RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 GABARAPL1Q9H0R8 117 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SH3BGRL3Q9H299 93 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SMDT1Q9H4I9 107 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 NMNAT1Q9HAN9 279 aaPredicted RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GPR84Q9NQS5 396 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PRTFDC1Q9NRG1 225 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ACER3Q9NUN7 267 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GID8Q9NWU2 228 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 FBXL12Q9NXK8 326 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DNAJC12Q9UKB3 198 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PRNDQ9UKY0 176 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PYCARDQ9ULZ3 195 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 FAM215AQ9Y5M1 114 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TRAPPC1Q9Y5R8 145 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TMEM56-RWDD3S4R434 201 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TECPR2O15040 1411 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 UHRF1BP1Q6BDS2 1440 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SCAF11Q99590 1463 aaKnown RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ARHGEF11O15085 1522 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 RP1L1Q8IWN7 2480 aaPredicted RBP0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 FANCMQ8IYD8 2048 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 LAMB2P55268 1798 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 RIMBP3CA6NJZ7 1639 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 RIMBP3BA6NNM3 1639 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 RIMBP3Q9UFD9 1639 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TCOF1Q13428 1488 aaKnown RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ERBINQ96RT1 1412 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TRBV19A0A075B6N1 114 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GNG14A0A1W2PPG7 69 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DHRS12A0PJE2 317 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 FUOMA2VDF0 154 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 A8MWP6 167 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GGTLC3B5MD39 225 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PPP5D1E7EU14 171 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GPR31O00270 319 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SLC25A20O43772 301 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 LY6HO94772 140 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ATG12O94817 140 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 NRASP01111 189 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 HRASP01112 189 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 KRASP01116 189 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 NPYP01303 97 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PPBPP02775 128 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SERPINE1P05121 402 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CRHP06850 196 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GUSBP08236 651 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SRP19P09132 144 aaKnown RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ZNF22P17026 224 aaPredicted RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SPI1P17947 270 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 RPS4Y1P22090 263 aaKnown RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CD24P25063 80 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ATP6V0CP27449 155 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ATP5G3P48201 142 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TAS2R41P59536 307 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TAS2R45P59539 299 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 RHOBP62745 196 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DEFA6Q01524 100 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DEFB115Q30KQ5 88 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 ZNF660Q6AZW8 331 aaPredicted RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TOMM20LQ6UXN7 152 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 C2orf91Q6ZV80 131 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SSX8Q7RTT4 187 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 GRINAQ7Z429 371 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 KTN1-AS1Q86SY8 53 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 LHFPL1Q86WI0 220 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OR4K13Q8NH42 304 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 PLEKHB2Q96CS7 222 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DCUN1D1Q96GG9 259 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SERPINI1Q99574 410 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SELENOSQ9BQE4 189 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OR8D2Q9GZM6 311 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 EFCAB1Q9HAE3 211 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CXorf21Q9HAI6 301 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 XAGE1AQ9HD64 81 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 BIN3Q9NQY0 253 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 C19orf12Q9NSK7 152 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 OPTCQ9UBM4 332 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 SS18L2Q9UHA2 77 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 CYSLTR1Q9Y271 337 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 UFC1Q9Y3C8 167 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 AMMECR1Q9Y4X0 333 aaPredicted RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 RBM7Q9Y580 266 aaKnown RBP0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 HEY1Q9Y5J3 304 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 BRWD1Q9NSI6 2320 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DOCK10Q96BY6 2186 aa0.76□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 COL24A1Q17RW2 1714 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DISP1Q96F81 1524 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TONSLQ96HA7 1378 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 IGLV3-9A0A075B6K5 115 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 A0A087WX48 190 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TRAV38-1A0A0B4J264 116 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 TRAV41A0A0B4J266 112 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 A0A0B4J2C4 111 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 A0A1B0GV72 72 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 A0A1W2PNM2 257 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 IGSF23A1L1A6 192 aa0.75□□□□□ -2.29
NPHP3-ACAD11-202ENST00000632629 DPRXA6NFQ7 191 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms