RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 CYB5BO43169 146 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 P0C879 139 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 UCP1P25874 307 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 GPR183P32249 361 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 AKR1C2P52895 323 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 HSPE1P61604 102 aaKnown RBP10.78□□□□□ -0.68
PNKP-223ENST00000629179 PRCDQ00LT1 54 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 SURF2Q15527 256 aaPredicted RBP10.78□□□□□ -0.68
PNKP-223ENST00000629179 PYDC2Q56P42 97 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 SPINK9Q5DT21 86 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 VN1R17PQ8TDU5 208 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 PRRT1Q99946 306 aa10.78□□□□□ -0.68
PNKP-223ENST00000629179 A0A0B4J293 547 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 IGHV3-35A0A0C4DH35 117 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 A0A0G2JRQ6 117 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 ZNF320A2RRD8 509 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 C2orf70A6NJV1 201 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 ZNF701M0R085 212 aaPredicted RBP10.77□□□□□ -0.69
PNKP-223ENST00000629179 LGALS9O00182 355 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 ATG12O94817 140 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 OR5AC1P0C628 307 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 S100A5P33763 92 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 FAM106AQ4KMX7 169 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 Q8N1Y9 231 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 OR2C3Q8N628 320 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 GLYATL2Q8WU03 294 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 TMEM222Q9H0R3 208 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 NAA60Q9H7X0 242 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 MCUBQ9NWR8 336 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 SCP2D1Q9UJQ7 156 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 V9GYH0 126 aa10.77□□□□□ -0.69
PNKP-223ENST00000629179 OR2T8A6NH00 312 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 K7EIM0 57 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 ST8SIA3O43173 380 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 B3GALNT1O75752 331 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 FOLR2P14207 255 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 ZNF79Q15937 498 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 LCN12Q6JVE5 192 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 PLET1Q6UQ28 207 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 CCDC190Q86UF4 302 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 Q8N402 240 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 OR1P1Q8NH06 330 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 LHFPL5Q8TAF8 219 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 SCARB1Q8WTV0 552 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 SLC2A8Q9NY64 477 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 SELENOKQ9Y6D0 94 aa10.76□□□□□ -0.69
PNKP-223ENST00000629179 CRYM-AS1A6NIL9 109 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 TGOLN2O43493 480 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 CDS2O95674 445 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 KLF9Q13886 244 aaPredicted RBP10.75□□□□□ -0.69
PNKP-223ENST00000629179 DEFB114Q30KQ6 69 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
PNKP-223ENST00000629179 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 Q6ZRM9 215 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 SELENOHQ8IZQ5 122 aaKnown RBP10.75□□□□□ -0.69
PNKP-223ENST00000629179 OR1L6Q8NGR2 347 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 RNASE11Q8TAA1 199 aaKnown RBP10.75□□□□□ -0.69
PNKP-223ENST00000629179 DYNLRB2Q8TF09 96 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 CACNG8Q8WXS5 425 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 TRIM63Q969Q1 353 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 TMEM230Q96A57 120 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 RRNAD1Q96FB5 475 aaKnown RBP10.75□□□□□ -0.69
PNKP-223ENST00000629179 MISP3Q96FF7 219 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 DNAH9Q9NYC9 4486 aa10.75□□□□□ -0.69
PNKP-223ENST00000629179 TMEM213A2RRL7 107 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 F8W735 103 aaPredicted RBP10.74□□□□□ -0.69
PNKP-223ENST00000629179 IFNA17P01571 189 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 FRMD6-AS1P0C7T7 363 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 NHLRC4P0CG21 123 aaPredicted RBP10.74□□□□□ -0.69
PNKP-223ENST00000629179 CBLN1P23435 193 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 ETV6P41212 452 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 ERHP84090 104 aaKnown RBP10.74□□□□□ -0.69
PNKP-223ENST00000629179 DHODHQ02127 395 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 TM4SF20Q53R12 229 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 SBSPONQ8IVN8 264 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 TOMM5Q8N4H5 51 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 UBAC2Q8NBM4 344 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 OR2K2Q8NGT1 345 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 CHRDL1Q9BU40 450 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 PRR13Q9NZ81 148 aa10.74□□□□□ -0.69
PNKP-223ENST00000629179 STAB2Q8WWQ8 2551 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 ZNF785A8K8V0 405 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 A8MWP6 167 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 I3L2K1 104 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 IGHV3-48P01763 117 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 IGHV4-30-4P0DP06 118 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 AKR1C4P17516 323 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 Q56UQ5 140 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 TMEM268Q5VZI3 342 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 SGPP2Q8IWX5 399 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 UXS1Q8NBZ7 420 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 ZNF114Q8NC26 417 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 RBPMSQ93062 196 aaKnown RBP10.73□□□□□ -0.69
PNKP-223ENST00000629179 GPR146Q96CH1 333 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 BSCL2Q96G97 398 aaPredicted RBP10.73□□□□□ -0.69
PNKP-223ENST00000629179 SCGB3A2Q96PL1 93 aa10.73□□□□□ -0.69
PNKP-223ENST00000629179 PDCD10Q9BUL8 212 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms