RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 CISHQ9NSE2 258 aa0.24□□□□□ -2.37
SCARNA4-201ENST00000629045 IMP3Q9NV31 184 aaKnown RBP0.24□□□□□ -2.37
SCARNA4-201ENST00000629045 CKLFQ9UBR5 152 aa0.24□□□□□ -2.37
SCARNA4-201ENST00000629045 C3orf18Q9UK00 162 aa0.24□□□□□ -2.37
SCARNA4-201ENST00000629045 EML5Q05BV3 1969 aa0.24□□□□□ -2.37
SCARNA4-201ENST00000629045 IGKV1D-42A0A075B6H8 117 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 A0A0J9YY10 115 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 A0A1B0GX78 115 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 EVPLLA8MZ36 301 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 APOEP02649 317 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 CTSDP07339 412 aaPredicted RBP0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 ASAH2BP0C7U1 165 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 C8orf88P0DMB2 117 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 SPI1P17947 270 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 MARCKSL1P49006 195 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 BLVRAP53004 296 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 MLLT11Q13015 90 aaPredicted RBP0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 GRK1Q15835 563 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 KCNJ8Q15842 424 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 COQ5Q5HYK3 327 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 AADACL3Q5VUY0 350 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 BPIFA4PQ86YQ2 179 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 C1orf158Q8N1D5 194 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 LINC00311Q8N616 119 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 MCFD2Q8NI22 146 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 GINS4Q9BRT9 223 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 DERL1Q9BUN8 251 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 LAMB4A4D0S4 1761 aa0.23□□□□□ -2.37
SCARNA4-201ENST00000629045 ABCC11Q96J66 1382 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 A0A0D9SG52 128 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 C2orf70A6NJV1 201 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 CLDN25C9JDP6 229 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 GOLGA6L19H0YKK7 550 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 M0R2N4 97 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 CXCR6O00574 342 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 OR1I1O60431 355 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 CRYGAP11844 174 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 UCHL3P15374 230 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 MYL12AP19105 171 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 RAB4BP61018 213 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 MED21Q13503 144 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 SPANXN5Q5MJ07 72 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 GDF5OSQ5U4N7 250 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 LRRN1Q6UXK5 716 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 DPPA3Q6W0C5 159 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 DEFB128Q7Z7B8 93 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 IQCF2Q8IXL9 164 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 Q8N6K4 173 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 PFN4Q8NHR9 129 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 PIGXQ8TBF5 258 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 ZNF418Q8TF45 676 aaPredicted RBP0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 RAB8BQ92930 207 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 SCGB3A1Q96QR1 104 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 ACER3Q9NUN7 267 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 ZFC3H1O60293 1989 aaKnown RBP0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 USP24Q9UPU5 2620 aa0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 SNRNP200O75643 2136 aaKnown RBP0.22□□□□□ -2.37
SCARNA4-201ENST00000629045 DCCP43146 1447 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 MUC5BQ9HC84 5762 aaPredicted RBP0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 MED12Q93074 2177 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 A0A1B0GV50 99 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 INMT-MINDY4F8WBC2 141 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 ACOX3O15254 700 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 COX5BP10606 129 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST1H2BOP23527 126 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 RPS12P25398 132 aaKnown RBP0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 CASQ1P31415 396 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST1H2BBP33778 126 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST1H2BDP58876 126 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 CNBPP62633 177 aaKnown RBP0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST1H2BCP62807 126 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 PDE6HQ13956 83 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST2H2BEQ16778 126 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 SPANXN3Q5MJ09 141 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 RPL22L1Q6P5R6 122 aaKnown RBP0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 FAM9CQ8IZT9 166 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 OR4E2Q8NGC2 313 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST1H2BHQ93079 126 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 AMELYQ99218 206 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST1H2BNQ99877 126 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 HIST1H2BMQ99879 126 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 WDR61Q9GZS3 305 aaKnown RBP0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 FGFR1OP2Q9NVK5 253 aa0.21□□□□□ -2.38
SCARNA4-201ENST00000629045 TRBV6-8A0A0A6YYG3 113 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 A0A0A6YYH2 397 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 A6NJ64 397 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 H0Y980 276 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 M0QX08 132 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 M0QZ92 97 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 UBL3O95164 117 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 OCM2P0CE71 109 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 MIFP14174 115 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 NAA20P61599 178 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 OGFRL1Q5TC84 451 aaPredicted RBP0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 SPATA8Q6RVD6 105 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 Q6ZS49 121 aa0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 CLVS1Q8IUQ0 354 aaPredicted RBP0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 MRPL30Q8TCC3 161 aaKnown RBP0.2□□□□□ -2.38
SCARNA4-201ENST00000629045 KLK6Q92876 244 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms