RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 OR2C3Q8N628 320 aa8.46□□□□□ -1.06
DDX41-219ENST00000629036 ZNF502Q8TBZ5 544 aa8.46□□□□□ -1.06
DDX41-219ENST00000629036 DEDD2Q8WXF8 326 aa8.46□□□□□ -1.06
DDX41-219ENST00000629036 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
DDX41-219ENST00000629036 TSC22D3Q99576 134 aa8.46□□□□□ -1.06
DDX41-219ENST00000629036 C14orf166Q9Y224 244 aaKnown RBP8.46□□□□□ -1.06
DDX41-219ENST00000629036 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
DDX41-219ENST00000629036 ST8SIA3O43173 380 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 SNAPC5O75971 98 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 IGLV1-51P01701 117 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 IGHV3-23P01764 117 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 HIST1H1BP16401 226 aaKnown RBP8.45□□□□□ -1.06
DDX41-219ENST00000629036 INSL3P51460 131 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 MECP2P51608 486 aaKnown RBP8.45□□□□□ -1.06
DDX41-219ENST00000629036 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 DHODHQ02127 395 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 NMSQ5H8A3 153 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 HSD17B13Q7Z5P4 300 aaPredicted RBP8.45□□□□□ -1.06
DDX41-219ENST00000629036 HAPLN4Q86UW8 402 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 TOMM5Q8N4H5 51 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 RBPMSQ93062 196 aaKnown RBP8.45□□□□□ -1.06
DDX41-219ENST00000629036 MCUBQ9NWR8 336 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 SCP2D1Q9UJQ7 156 aa8.45□□□□□ -1.06
DDX41-219ENST00000629036 LSM4Q9Y4Z0 139 aaKnown RBP8.45□□□□□ -1.06
DDX41-219ENST00000629036 HLA-AP01891 365 aaKnown RBP8.44□□□□□ -1.06
DDX41-219ENST00000629036 CSN3P07498 182 aa8.44□□□□□ -1.06
DDX41-219ENST00000629036 IL7P13232 177 aa8.44□□□□□ -1.06
DDX41-219ENST00000629036 HSPE1P61604 102 aaKnown RBP8.44□□□□□ -1.06
DDX41-219ENST00000629036 BSXQ3C1V8 233 aa8.44□□□□□ -1.06
DDX41-219ENST00000629036 OR9G4Q8NGQ1 327 aa8.44□□□□□ -1.06
DDX41-219ENST00000629036 FKBP11Q9NYL4 201 aa8.44□□□□□ -1.06
DDX41-219ENST00000629036 SIGLEC8Q9NYZ4 499 aa8.44□□□□□ -1.06
DDX41-219ENST00000629036 A8MWP6 167 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 I3L2K1 104 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 SAP30O75446 220 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 DHFRP00374 187 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 ADMP35318 185 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 CCR6P51684 374 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 AKR1C2P52895 323 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 AP3S2P59780 193 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 TRIM16LQ309B1 348 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 CNPY1Q3B7I2 92 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 SPINK9Q5DT21 86 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 TMEM268Q5VZI3 342 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 CLEC19AQ6UXS0 136 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 FAM219AQ8IW50 185 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 SLC35G3Q8N808 338 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 OR1P1Q8NH06 330 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 OR4A16Q8NH70 328 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 VN1R17PQ8TDU5 208 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 IL22RA2Q969J5 263 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 GPR146Q96CH1 333 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 PRR25Q96S07 402 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 HINT2Q9BX68 163 aa8.43□□□□□ -1.06
DDX41-219ENST00000629036 TRBV7-1A0A0A6YYK4 115 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 TMEM213A2RRL7 107 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 LGALS9O00182 355 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 PLA2G10O15496 165 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 RNASE2P10153 161 aaKnown RBP8.42□□□□□ -1.06
DDX41-219ENST00000629036 SPNP16150 400 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 FAUP35544 74 aaKnown RBP8.42□□□□□ -1.06
DDX41-219ENST00000629036 RPEL1Q2QD12 228 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 ANKRD55Q3KP44 614 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 FAM209BQ5JX69 171 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 UNQ9165/PRO28630Q6UXU0 137 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 LINC00299Q6ZSB3 139 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 GPHB5Q86YW7 130 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 SCARB1Q8WTV0 552 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 TMEM170AQ8WVE7 144 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 EEF1AKMT3Q96AZ1 226 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 CXorf58Q96LI9 332 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 WWC2-AS2Q96NR7 200 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 SLC25A21Q9BQT8 299 aaPredicted RBP8.42□□□□□ -1.06
DDX41-219ENST00000629036 ZNF436Q9C0F3 470 aaPredicted RBP8.42□□□□□ -1.06
DDX41-219ENST00000629036 CACNG5Q9UF02 275 aa8.42□□□□□ -1.06
DDX41-219ENST00000629036 ZNF256Q9Y2P7 627 aaPredicted RBP8.42□□□□□ -1.06
DDX41-219ENST00000629036 DYNC2H1Q8NCM8 4307 aaKnown RBP8.41□□□□□ -1.06
DDX41-219ENST00000629036 A0A0B4J2A0 478 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 IZUMO1RA6ND01 250 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 GGCTO75223 188 aaKnown RBP8.41□□□□□ -1.06
DDX41-219ENST00000629036 NDUFB6O95139 128 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 OR2C1O95371 312 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 DEFA4P12838 97 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 FCGR2BP31994 310 aaPredicted RBP8.41□□□□□ -1.06
DDX41-219ENST00000629036 GPR183P32249 361 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 ARL3P36405 182 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 PPP1R1AQ13522 171 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 LYZL2Q7Z4W2 148 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 SGPP2Q8IWX5 399 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 LRTM2Q8N967 370 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 OR52E5Q8NH55 327 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 ATP6V0BQ99437 205 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 CHRDL1Q9BU40 450 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 PLEKHA3Q9HB20 300 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 MRPL36Q9P0J6 103 aaKnown RBP8.41□□□□□ -1.06
DDX41-219ENST00000629036 SHPKQ9UHJ6 478 aa8.41□□□□□ -1.06
DDX41-219ENST00000629036 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
DDX41-219ENST00000629036 C2orf70A6NJV1 201 aa8.4□□□□□ -1.06
DDX41-219ENST00000629036 TGOLN2O43493 480 aa8.4□□□□□ -1.06
DDX41-219ENST00000629036 PITX3O75364 302 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms