RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 DEFB112Q30KQ8 113 aa19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 HSD17B13Q7Z5P4 300 aaPredicted RBP19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 SRSF8Q9BRL6 282 aaKnown RBP19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 SLC25A33Q9BSK2 321 aa19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 TEX15Q9BXT5 2789 aa19.75■□□□□ 0.75
CAPNS1-215ENST00000628018 MDFIC2A0A1B0GVS7 189 aa19.75■□□□□ 0.75
CAPNS1-215ENST00000628018 H3BUX3 64 aa19.75■□□□□ 0.75
CAPNS1-215ENST00000628018 IFNA4P05014 189 aa19.75■□□□□ 0.75
CAPNS1-215ENST00000628018 CX3CL1P78423 397 aa19.75■□□□□ 0.75
CAPNS1-215ENST00000628018 RASL11BQ9BPW5 248 aa19.75■□□□□ 0.75
CAPNS1-215ENST00000628018 A6NDX4 124 aa19.74■□□□□ 0.75
CAPNS1-215ENST00000628018 CD5LO43866 347 aa19.74■□□□□ 0.75
CAPNS1-215ENST00000628018 VWC2Q2TAL6 325 aa19.74■□□□□ 0.75
CAPNS1-215ENST00000628018 TUSC1Q2TAM9 212 aa19.74■□□□□ 0.75
CAPNS1-215ENST00000628018 TMEM219Q86XT9 240 aa19.74■□□□□ 0.75
CAPNS1-215ENST00000628018 P2RX4Q99571 388 aa19.74■□□□□ 0.75
CAPNS1-215ENST00000628018 TMEM147Q9BVK8 224 aa19.74■□□□□ 0.75
CAPNS1-215ENST00000628018 FLNAP21333 2647 aaKnown RBP19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 IFNA5P01569 189 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 AREGP15514 252 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 C5orf56Q8N8D9 126 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 HSD17B11Q8NBQ5 300 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 ZNF114Q8NC26 417 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 TMED6Q8WW62 240 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 SSMEM1Q8WWF3 244 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 C22orf15Q8WYQ4 148 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 GGACTQ9BVM4 153 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 PARD6GQ9BYG4 376 aaPredicted RBP19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 MOB4Q9Y3A3 225 aa19.73■□□□□ 0.75
CAPNS1-215ENST00000628018 CSPG4Q6UVK1 2322 aa19.72■□□□□ 0.75
CAPNS1-215ENST00000628018 IGHV7-81A0A0B4J1V7 117 aa19.72■□□□□ 0.75
CAPNS1-215ENST00000628018 FGF16O43320 207 aa19.72■□□□□ 0.75
CAPNS1-215ENST00000628018 REG1AP05451 166 aa19.72■□□□□ 0.75
CAPNS1-215ENST00000628018 SUB1P53999 127 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■■■□□ 18.2
CAPNS1-215ENST00000628018 EIF5AL1Q6IS14 154 aaKnown RBP19.72■□□□□ 0.75
CAPNS1-215ENST00000628018 TEX29Q8N6K0 151 aa19.72■□□□□ 0.75
CAPNS1-215ENST00000628018 ARPC1AQ92747 370 aa19.72■□□□□ 0.75
CAPNS1-215ENST00000628018 UQCC1Q9NVA1 299 aa19.72■□□□□ 0.75
CAPNS1-215ENST00000628018 APELAP0DMC3 54 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 SPP1P10451 314 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 DLK1P80370 383 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 NDPQ00604 133 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 PVRIGQ6DKI7 326 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 FLNBO75369 2602 aaKnown RBP19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 FBXO24O75426 580 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 SEC11BP0C7V7 166 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 ATP6V0CP27449 155 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 LY6EQ16553 131 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 FAM74A1Q5RGS3 127 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 FAM103A1Q9BTL3 118 aaKnown RBP19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 WDR61Q9GZS3 305 aaKnown RBP19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 PITPNC1Q9UKF7 332 aa19.71■□□□□ 0.75
CAPNS1-215ENST00000628018 UBE2L5PA0A1B0GUS4 154 aa19.7■□□□□ 0.74
CAPNS1-215ENST00000628018 AMY1AP04745 511 aa19.7■□□□□ 0.74
CAPNS1-215ENST00000628018 SLC25A24Q6NUK1 477 aa19.7■□□□□ 0.74
CAPNS1-215ENST00000628018 HSPB9Q9BQS6 159 aa19.7■□□□□ 0.74
CAPNS1-215ENST00000628018 SH3BGRL3Q9H299 93 aa19.7■□□□□ 0.74
CAPNS1-215ENST00000628018 MDKP21741 143 aaPredicted RBP19.69■□□□□ 0.74
CAPNS1-215ENST00000628018 IER3P46695 156 aa19.69■□□□□ 0.74
CAPNS1-215ENST00000628018 SCGB1C1Q8TD33 95 aa19.69■□□□□ 0.74
CAPNS1-215ENST00000628018 ABHD5Q8WTS1 349 aa19.69■□□□□ 0.74
CAPNS1-215ENST00000628018 GNPNAT1Q96EK6 184 aaPredicted RBP19.69■□□□□ 0.74
CAPNS1-215ENST00000628018 SLC25A32Q9H2D1 315 aa19.69■□□□□ 0.74
CAPNS1-215ENST00000628018 NAV3Q8IVL0 2385 aa19.69■□□□□ 0.74
CAPNS1-215ENST00000628018 RPS10-NUDT3A0A1W2PQS6 291 aa19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 EGR2P11161 476 aaPredicted RBP19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 RUNX1Q01196 453 aa19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 OR1P1Q8NH06 330 aa19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 RNASEH2CQ8TDP1 164 aaKnown RBP19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 TAF15Q92804 592 aaKnown RBP eCLIP19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 ZNF48Q96MX3 618 aaPredicted RBP19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 PRDM13Q9H4Q3 707 aa19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 PLA2G2EQ9NZK7 142 aa19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 FBXO7Q9Y3I1 522 aa19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 F11RQ9Y624 299 aaKnown RBP19.68■□□□□ 0.74
CAPNS1-215ENST00000628018 FNDC10F2Z333 226 aa19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 CTRB1P17538 263 aa19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 MFAP2P55001 183 aa19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 ARSJQ5FYB0 599 aaPredicted RBP19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 CLLU1Q5K131 121 aa19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 ASPHD1Q5U4P2 390 aa19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 CTRB2Q6GPI1 263 aa19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 Q6YL49 198 aa19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 C16orf82Q7Z2V1 217 aa19.67■□□□□ 0.74
CAPNS1-215ENST00000628018 IGHV4-59P01825 116 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 FAM157CP0CG43 387 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 CD69Q07108 199 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 C19orf35Q6ZS72 473 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 WDR83OSQ9Y284 106 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 RFNGQ9Y644 331 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 CRYGCP07315 174 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 GPX4P36969 197 aaPredicted RBP19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 RAB14P61106 215 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 TREML4Q6UXN2 200 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 PCNPQ8WW12 178 aaKnown RBP19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 NPVFQ9HCQ7 196 aa19.66■□□□□ 0.74
CAPNS1-215ENST00000628018 SH2D7A6NKC9 451 aaPredicted RBP19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 NPIPB5A8MRT5 1133 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 M0QZK8 103 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 SPNS3Q6ZMD2 512 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms