RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 IL36BQ9NZH7 164 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 ATP5G3P48201 142 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 KCNS1Q96KK3 526 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 C18orf15Q96N68 181 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 TAF1LQ8IZX4 1826 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 TMEM136Q6ZRR5 245 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 FMC1Q96HJ9 113 aa10.74□□□□□ -0.69
SCN8A-209ENST00000627620 ZNF414Q96IQ9 312 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 LYZL4Q96KX0 146 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 DMRTA2Q96SC8 542 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 BRWD3Q6RI45 1802 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 NBR2O15453 112 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 ZFP36L1Q07352 338 aaKnown RBP10.73□□□□□ -0.69
SCN8A-209ENST00000627620 REC114Q7Z4M0 266 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 TMEM101Q96IK0 257 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 MRPS16Q9Y3D3 137 aaKnown RBP10.73□□□□□ -0.69
SCN8A-209ENST00000627620 OR11H12B2RN74 326 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 CSRP1P21291 193 aaKnown RBP10.73□□□□□ -0.69
SCN8A-209ENST00000627620 ZNF525Q8N782 197 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 OR11H1Q8NG94 326 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 OR11H2Q8NH07 326 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 IGLV3-32A0A0A0MS00 114 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 YPEL1O60688 119 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 SRP19P09132 144 aaKnown RBP10.73□□□□□ -0.69
SCN8A-209ENST00000627620 OR13C6PQ8NH95 151 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 YPEL2Q96QA6 119 aa10.73□□□□□ -0.69
SCN8A-209ENST00000627620 A0A1W2PRX2 142 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 UPK2O00526 184 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
SCN8A-209ENST00000627620 CBLN4Q9NTU7 201 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 ZDBF2Q9HCK1 2354 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 IGKV1D-13A0A0B4J2D9 117 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 A0A1B0GUT8 65 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 IGKV1-13P0DP09 117 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 Q9H3A6 140 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 BEX4Q9NWD9 120 aaPredicted RBP10.72□□□□□ -0.69
SCN8A-209ENST00000627620 SBF2Q86WG5 1849 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 TRAV8-6A0A0B4J262 113 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 PINLYPA6NC86 204 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 TFF1P04155 84 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 RNASE4P34096 147 aaKnown RBP10.72□□□□□ -0.69
SCN8A-209ENST00000627620 COLCA1Q6ZS62 124 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 TMEM183AQ8IXX5 376 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 LRTM2Q8N967 370 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 RPP21Q9H633 154 aaKnown RBP10.72□□□□□ -0.69
SCN8A-209ENST00000627620 YAE1D1Q9NRH1 226 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 IGKV1-9A0A0C4DH69 117 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.72□□□□□ -0.69
SCN8A-209ENST00000627620 PMCHL2Q9BQD1 86 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 SPRR3Q9UBC9 169 aa10.72□□□□□ -0.69
SCN8A-209ENST00000627620 MDC1Q14676 2089 aaKnown RBP10.72□□□□□ -0.69
SCN8A-209ENST00000627620 APOHP02749 345 aaPredicted RBP10.71□□□□□ -0.69
SCN8A-209ENST00000627620 RNF222A6NCQ9 220 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 DPRXA6NFQ7 191 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 MARVELD3Q96A59 401 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 IMMP2LQ96T52 175 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 SNRNP200O75643 2136 aaKnown RBP10.71□□□□□ -0.69
SCN8A-209ENST00000627620 A0A087WV48 116 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 LYPD3O95274 346 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 MORN2Q502X0 79 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 ZNF497Q6ZNH5 498 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 NR2C2APQ86WQ0 139 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 C18orf12Q96KH6 178 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 MESP1Q9BRJ9 268 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 TMEM133Q9H2Q1 129 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 PLXNA1Q9UIW2 1896 aa10.71□□□□□ -0.69
SCN8A-209ENST00000627620 LINC00271P0C7V0 271 aa10.71□□□□□ -0.7
SCN8A-209ENST00000627620 LINC01587Q99440 93 aa10.71□□□□□ -0.7
SCN8A-209ENST00000627620 ANKRD36A6QL64 1941 aa10.71□□□□□ -0.7
SCN8A-209ENST00000627620 TMEM144Q7Z5S9 345 aa10.71□□□□□ -0.7
SCN8A-209ENST00000627620 CIARTQ8N365 385 aaPredicted RBP10.71□□□□□ -0.7
SCN8A-209ENST00000627620 BRCA1P38398 1863 aaKnown RBP10.7□□□□□ -0.7
SCN8A-209ENST00000627620 IGHV1-18A0A0C4DH31 117 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 LYNX1G3V0Z9 82 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 LYNX1P0DP58 116 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 CCL1P22362 96 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 CARHSP1Q9Y2V2 147 aaKnown RBP10.7□□□□□ -0.7
SCN8A-209ENST00000627620 ALKBH7Q9BT30 221 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-209ENST00000627620 ALPK2Q86TB3 2170 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 ABCA7Q8IZY2 2146 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 TRAV14DV4A0A0A6YYC5 116 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 CD24P25063 80 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 SCGB3A1Q96QR1 104 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 C15orf61A6NNL5 157 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 ZNF362Q5T0B9 420 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-209ENST00000627620 FAM131CQ96AQ9 280 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 PEMTQ9UBM1 199 aa10.7□□□□□ -0.7
SCN8A-209ENST00000627620 CRIPAKQ8N1N5 446 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 FER1L6-AS1Q8NA97 138 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 ZNF418Q8TF45 676 aaPredicted RBP10.69□□□□□ -0.7
SCN8A-209ENST00000627620 PARD6GQ9BYG4 376 aaPredicted RBP10.69□□□□□ -0.7
SCN8A-209ENST00000627620 MTCL1Q9Y4B5 1905 aaKnown RBP10.69□□□□□ -0.7
SCN8A-209ENST00000627620 PRR32B1ATL7 298 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 THBDP07204 575 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 SDF2L1Q9HCN8 221 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 ZNF319Q9P2F9 582 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms