RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SSBP2P81877 361 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 PJVKQ0ZLH3 352 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 SLC25A24Q6NUK1 477 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 OR10P1Q8NGE3 313 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 OR1L8Q8NGR8 309 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 PINX1Q96BK5 328 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 ZNF430Q9H8G1 570 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 RFNGQ9Y644 331 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 AUP1Q9Y679 476 aa7.59□□□□□ -1.19
PDLIM5-223ENST00000627587 CENPVL3A0A0U1RRI6 287 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 J3QLI3 93 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 NPFFO15130 113 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 ACTL6BO94805 426 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 MOSP00540 346 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 IFNA5P01569 189 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 IGKV1D-33P01593 117 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 IGKV1-33P01594 117 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 OPN1MWP04001 364 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 OR8U8P0C7N1 319 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 OPN1MW2P0DN77 364 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 OPN1MW3P0DN78 364 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 GATA3P23771 443 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 SAA4P35542 130 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 RAB11AP62491 216 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 SLC38A11Q08AI6 406 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 HES1Q14469 280 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 PSG5Q15238 335 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 MMD2Q8IY49 270 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 HSD17B11Q8NBQ5 300 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 LRRC20Q8TCA0 184 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 RNF141Q8WVD5 230 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 GINS3Q9BRX5 216 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 METTL1Q9UBP6 276 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 PRSS46E5RG02 174 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 SEC11BP0C7V7 166 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 CD24P25063 80 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 PLGLAQ15195 96 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 MMDQ15546 238 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 ATP6V1FQ16864 119 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 C10orf55Q5SWW7 151 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 PPP1R27Q86WC6 154 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 SLC24A4Q8NFF2 622 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 OR2T10Q8NGZ9 312 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 SH3BGRL3Q9H299 93 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 C7orf69Q9H7B7 122 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 NDUFA4L2Q9NRX3 87 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 SIGLEC9Q9Y336 463 aa7.58□□□□□ -1.2
PDLIM5-223ENST00000627587 TRAV40A0A0B4J280 105 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 A0A1W2PN81 502 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 RRHO14718 337 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 IFNA4P05014 189 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 SNRNP70P08621 437 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 SPP1P10451 314 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 NPY1RP25929 384 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 MAS1LP35410 378 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 CHRNA7P36544 502 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 HNF4GQ14541 408 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 PRSS8Q16651 343 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 ETV3LQ6ZN32 361 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 OR10W1Q8NGF6 305 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 SCGB1C1Q8TD33 95 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 GNPNAT1Q96EK6 184 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 EAF1Q96JC9 268 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 CXorf58Q96LI9 332 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 KIAA1456Q9P272 454 aa7.57□□□□□ -1.2
PDLIM5-223ENST00000627587 IGHV1-69DA0A0B4J2H0 117 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 LINC00862A6NCI5 91 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 NBR2O15453 112 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 FGF16O43320 207 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 AVPP01185 164 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 IGHV1-69P01742 117 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 ATP6V0CP27449 155 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 BRS3P32247 399 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 SNCAP37840 140 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 ATP5IP56385 69 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 ERHP84090 104 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 TNXAQ16473 311 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 BSXQ3C1V8 233 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 MRPL41Q8IXM3 137 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 NANPQ8TBE9 248 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 TMEM147Q9BVK8 224 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 FBXL15Q9H469 300 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 UQCC1Q9NVA1 299 aa7.56□□□□□ -1.2
PDLIM5-223ENST00000627587 UBE2L5PA0A1B0GUS4 154 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 INS-IGF2F8WCM5 200 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 FCN1O00602 326 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 NDUFA3O95167 84 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 CA2P00918 260 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 FAM106CPP0CH98 169 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 MDKP21741 143 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 RPL27AP46776 148 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 SULT1A2P50226 295 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 RUNX1Q01196 453 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 FOXL1Q12952 345 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 EBI3Q14213 229 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 LRRC75BQ2VPJ9 315 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 Q8N6K4 173 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 NPBQ8NG41 125 aa7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 PARD6GQ9BYG4 376 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-223ENST00000627587 IGHV3OR16-10A0A075B7F0 116 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 898.2 ms