RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CENPHQ9H3R5 247 aa0.94□□□□□ -2.26
VBP1-204ENST00000625964 FAM96AQ9H5X1 160 aa0.94□□□□□ -2.26
VBP1-204ENST00000625964 C16orf95Q9H693 158 aa0.94□□□□□ -2.26
VBP1-204ENST00000625964 ACOT13Q9NPJ3 140 aa0.94□□□□□ -2.26
VBP1-204ENST00000625964 PEF1Q9UBV8 284 aaKnown RBP0.94□□□□□ -2.26
VBP1-204ENST00000625964 GLS2Q9UI32 602 aa0.94□□□□□ -2.26
VBP1-204ENST00000625964 LINC00588Q9Y4M8 146 aa0.94□□□□□ -2.26
VBP1-204ENST00000625964 TRAV8-3A0A0A6YYJ7 113 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 LOC285095A0A1B0GVY8 99 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 A0A1B0GXF2 115 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 ODF3BA8MYP8 253 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 FNDC10F2Z333 226 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 LYNX1G3V0Z9 82 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 SLC25A20O43772 301 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 IFNA16P05015 189 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 LYNX1P0DP58 116 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 EVI2BP34910 448 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 RPA3P35244 121 aaPredicted RBP0.93□□□□□ -2.26
VBP1-204ENST00000625964 XIAPP98170 497 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 SLAMF1Q13291 335 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 CCSMST1Q4G0I0 132 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 TIMM23BQ5SRD1 257 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 CCDC122Q5T0U0 273 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 GLT6D1Q7Z4J2 308 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 RIBC1Q8N443 379 aaPredicted RBP0.93□□□□□ -2.26
VBP1-204ENST00000625964 ZNF321PQ8N8H1 164 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 DRAXINQ8NBI3 349 aaPredicted RBP0.93□□□□□ -2.26
VBP1-204ENST00000625964 DEFB108BQ8NET1 73 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 OR51L1Q8NGJ5 315 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 OR4C16Q8NGL9 310 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 ISOC1Q96CN7 298 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 IMP4Q96G21 291 aaKnown RBP0.93□□□□□ -2.26
VBP1-204ENST00000625964 PRAP1Q96NZ9 151 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 SNRNP25Q9BV90 132 aaKnown RBP0.93□□□□□ -2.26
VBP1-204ENST00000625964 CHID1Q9BWS9 393 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 OR8D2Q9GZM6 311 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 NXF2Q9GZY0 626 aaKnown RBP0.93□□□□□ -2.26
VBP1-204ENST00000625964 PRTFDC1Q9NRG1 225 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 SOX21Q9Y651 276 aaPredicted RBP0.93□□□□□ -2.26
VBP1-204ENST00000625964 V9GYY9 64 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 FAT2Q9NYQ8 4349 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 SCN3AQ9NY46 2000 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 VPS13DQ5THJ4 4388 aa0.93□□□□□ -2.26
VBP1-204ENST00000625964 DOCK11Q5JSL3 2073 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 HEATR5BQ9P2D3 2071 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 LOC102725191A0A1B0GVB3 256 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 MDFIC2A0A1B0GVS7 189 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 A0A1W2PQL4 384 aaPredicted RBP0.92□□□□□ -2.26
VBP1-204ENST00000625964 IGKV2-29A2NJV5 120 aaPredicted RBP0.92□□□□□ -2.26
VBP1-204ENST00000625964 PGPA6NDG6 321 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 K7EN84 100 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 KCNK1O00180 336 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 SPOPO43791 374 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 ZNF189O75820 626 aaPredicted RBP0.92□□□□□ -2.26
VBP1-204ENST00000625964 LYZL6O75951 148 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 LY6G6CO95867 125 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 CALB1P05937 261 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 OR4A8P0C604 315 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 CPMP14384 443 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 SRMP19623 302 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 MIPP30301 263 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 AGTR1P30556 359 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 CCR7P32248 378 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 C2orf80Q0P641 193 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 STX4Q12846 297 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 APOFQ13790 326 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 PAFAH1B3Q15102 231 aaKnown RBP0.92□□□□□ -2.26
VBP1-204ENST00000625964 STK38Q15208 465 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 TAF1AQ15573 450 aaPredicted RBP0.92□□□□□ -2.26
VBP1-204ENST00000625964 DEFB112Q30KQ8 113 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 FAM173BQ6P4H8 233 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 DCUN1D2Q6PH85 259 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 Q6ZT83 130 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 PHF13Q86YI8 300 aaPredicted RBP0.92□□□□□ -2.26
VBP1-204ENST00000625964 PLCZ1Q86YW0 608 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 RPP25LQ8N5L8 163 aaKnown RBP0.92□□□□□ -2.26
VBP1-204ENST00000625964 LINC00301Q8NCQ3 95 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 ZNF625Q96I27 306 aaPredicted RBP0.92□□□□□ -2.26
VBP1-204ENST00000625964 MCEEQ96PE7 176 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 C1QTNF6Q9BXI9 259 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 DIABLOQ9NR28 239 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 ARL5AQ9Y689 179 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 VPS13BQ7Z7G8 4022 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 MYCBP2O75592 4640 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 DNAH2Q9P225 4427 aa0.92□□□□□ -2.26
VBP1-204ENST00000625964 FAT4Q6V0I7 4981 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 ARHGAP32A7KAX9 2087 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 NCKAP5O14513 1909 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 HEATR1Q9H583 2144 aaKnown RBP0.91□□□□□ -2.26
VBP1-204ENST00000625964 ATP6V1G2-DDX39BF2Z307 99 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 RNASEK-C17orf49H0YIS7 233 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 TRAPPC2LH3BP13 241 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 hCG_2039718K7EN88 272 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 CCL22O00626 93 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 PRMT5O14744 637 aaPredicted RBP0.91□□□□□ -2.26
VBP1-204ENST00000625964 ENSAO43768 121 aaKnown RBP0.91□□□□□ -2.26
VBP1-204ENST00000625964 MFSD11O43934 449 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 GZMBP10144 247 aa0.91□□□□□ -2.26
VBP1-204ENST00000625964 DSCR4P56555 118 aaPredicted RBP0.91□□□□□ -2.26
VBP1-204ENST00000625964 RAB38P57729 211 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms