RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 CENPSQ8N2Z9 138 aa11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 RNASE11Q8TAA1 199 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 RRNAD1Q96FB5 475 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 FLVCR2Q9UPI3 526 aa11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 KCNIP3Q9Y2W7 256 aa11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 F11RQ9Y624 299 aaKnown RBP11.13□□□□□ -0.63
SOX2-OT-237ENST00000625581 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 MFSD2BA6NFX1 497 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 BMPR1BO00238 502 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 DEFA4P12838 97 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 HIST1H1BP16401 226 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 DEFA6Q01524 100 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 ANKRD55Q3KP44 614 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 SPINK9Q5DT21 86 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 NMSQ5H8A3 153 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 OR2C3Q8N628 320 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 ZNF114Q8NC26 417 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 MCRIP2Q9BUT9 160 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 RANGRFQ9HD47 186 aaPredicted RBP11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 PEF1Q9UBV8 284 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 S4R3C0 116 aa11.12□□□□□ -0.63
SOX2-OT-237ENST00000625581 A0A0B4J2A0 478 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 CENPXA8MT69 81 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 INS-IGF2F8WCM5 200 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 LYRM1O43325 122 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 SFT2D2O95562 160 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 IGHV3-23P01764 117 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 ANXA3P12429 323 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 MECP2P51608 486 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 EGFEM1PQ0D2K5 195 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 LYZL2Q7Z4W2 148 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 WDR12Q9GZL7 423 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 PLEKHA3Q9HB20 300 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 CACNG5Q9UF02 275 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 SHPKQ9UHJ6 478 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 TBC1D24Q9ULP9 559 aa11.11□□□□□ -0.63
SOX2-OT-237ENST00000625581 SEC14L6B5MCN3 397 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 OVOL1O14753 267 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 ZP3P21754 424 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 VAMP1P23763 118 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 KRTAP10-11P60412 298 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 UBE2MP61081 183 aaKnown RBP11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 SRPXP78539 464 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 PDLIM3Q53GG5 364 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 LGI3Q8N145 548 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 OR1P1Q8NH06 330 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 GPR61Q9BZJ8 451 aa11.1□□□□□ -0.63
SOX2-OT-237ENST00000625581 PPP5D1E7EU14 171 aa11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 K7EIM0 57 aa11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 IFNA17P01571 189 aa11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 PRB2P02812 416 aaPredicted RBP11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 KLF5Q13887 457 aaPredicted RBP11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 ZNF846Q147U1 533 aa11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 OR52E5Q8NH55 327 aa11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 ZNF502Q8TBZ5 544 aa11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 C20orf85Q9H1P6 137 aa11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.09□□□□□ -0.63
SOX2-OT-237ENST00000625581 DUXBA0A1W2PPF3 345 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 C9orf170A2RU37 121 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 F8W735 103 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 UPK1BO75841 260 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 SULT1A3P0DMM9 295 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 SULT1A4P0DMN0 295 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 ANXA7P20073 488 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 HOXA1P49639 335 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 IFITM3Q01628 133 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 ASAH1Q13510 395 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 FAM209BQ5JX69 171 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 PVRIGQ6DKI7 326 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 SLC25A24Q6NUK1 477 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 ACSM6Q6P461 480 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 CLEC19AQ6UXS0 136 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 VN1R17PQ8TDU5 208 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 CXorf58Q96LI9 332 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 PDCD10Q9BUL8 212 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 THYN1Q9P016 225 aa11.08□□□□□ -0.64
SOX2-OT-237ENST00000625581 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 CYB5BO43169 146 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 HLA-AP01891 365 aaKnown RBP11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 OR4E1P0C645 316 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 RNASE2P10153 161 aaKnown RBP11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 SYNJ2BPP57105 145 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 SPCS3P61009 180 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 DHRS2Q13268 280 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 SMCO1Q147U7 214 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 BSXQ3C1V8 233 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 IL34Q6ZMJ4 242 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 OR1L6Q8NGR2 347 aa11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 AURKAIP1Q9NWT8 199 aaPredicted RBP11.07□□□□□ -0.64
SOX2-OT-237ENST00000625581 IGHV3-21A0A0B4J1V1 117 aa11.06□□□□□ -0.64
SOX2-OT-237ENST00000625581 I3L2K1 104 aa11.06□□□□□ -0.64
SOX2-OT-237ENST00000625581 GGCTO75223 188 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms