RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MOSP00540 346 aa13.16□□□□□ -0.3
LDB3-208ENST00000623007 PVRIGQ6DKI7 326 aa13.16□□□□□ -0.3
LDB3-208ENST00000623007 FAM122CQ6P4D5 195 aa13.16□□□□□ -0.3
LDB3-208ENST00000623007 ATRAIDQ6UW56 229 aa13.16□□□□□ -0.3
LDB3-208ENST00000623007 RARRES2Q99969 163 aa13.16□□□□□ -0.3
LDB3-208ENST00000623007 TUBA4BQ9H853 241 aa13.16□□□□□ -0.3
LDB3-208ENST00000623007 METTL1Q9UBP6 276 aaKnown RBP13.16□□□□□ -0.3
LDB3-208ENST00000623007 PKD1L2Q7Z442 2459 aa13.16□□□□□ -0.3
LDB3-208ENST00000623007 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
LDB3-208ENST00000623007 VENTXO95231 258 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 CXorf1O96002 111 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 IGKV1D-33P01593 117 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 IGKV1-33P01594 117 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 DSCR9P59020 149 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 SELENOTP62341 195 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 MEF2BQ02080 365 aaPredicted RBP13.15□□□□□ -0.3
LDB3-208ENST00000623007 VMO1Q7Z5L0 202 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 NPBQ8NG41 125 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 OR2T10Q8NGZ9 312 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 RXFP4Q8TDU9 374 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 SLC25A22Q9H936 323 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 SIRT7Q9NRC8 400 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 ARL2-SNX15V9GYD0 113 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 ABCA4P78363 2273 aa13.15□□□□□ -0.3
LDB3-208ENST00000623007 OPN1MWP04001 364 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 OPN1MW2P0DN77 364 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 OPN1MW3P0DN78 364 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 OR13C7P0DN81 318 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 UBE2E1P51965 193 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 PRR20EP86478 221 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 PRR20CP86479 221 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 PRR20DP86480 221 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 PRR20BP86481 221 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 PRR20AP86496 221 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 TNXAQ16473 311 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 SLC16A13Q7RTY0 426 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 SIRPDQ9H106 197 aa13.15□□□□□ -0.31
LDB3-208ENST00000623007 M0R036 132 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 TIMM23O14925 209 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 TOX4O94842 621 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 FBP1P09467 338 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 PLGLAQ15195 96 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 STPG3Q8N7X2 389 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 OR1P1Q8NH06 330 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 MALSU1Q96EH3 234 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 BPESC1Q9GZL8 116 aa13.14□□□□□ -0.31
LDB3-208ENST00000623007 IGHV3-72A0A0B4J1Y9 119 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 NBR2O15453 112 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 PDE6DO43924 150 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 NDUFA3O95167 84 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 STAG3L2P0CL84 134 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 STAG3L3P0CL85 134 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 TAS2R45P59539 299 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 LMO4P61968 165 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 WT1-ASQ06250 92 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 GAMTQ14353 236 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 HCP5Q6MZN7 132 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.13□□□□□ -0.31
LDB3-208ENST00000623007 OR10W1Q8NGF6 305 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 CFHR4Q92496 578 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 FAM168AQ92567 244 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 C1RLQ9NZP8 487 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 SLC45A2Q9UMX9 530 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 ZFYVE26Q68DK2 2539 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 NBEAQ8NFP9 2946 aa13.13□□□□□ -0.31
LDB3-208ENST00000623007 IGHV4-39P01824 125 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 MYOD1P15172 320 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 BRS3P32247 399 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 NPBWR1P48145 328 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 FGF8P55075 233 aaPredicted RBP13.12□□□□□ -0.31
LDB3-208ENST00000623007 EBI3Q14213 229 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 SSX2Q16385 188 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 PFDN5Q99471 154 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
LDB3-208ENST00000623007 A0A087WWC5 75 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 IGLC7A0M8Q6 106 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 TSPAN4O14817 238 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 NDUFS7O75251 213 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 CLN5O75503 358 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 YIF1AO95070 293 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 PAX1P15863 534 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 HOXB4P17483 251 aaPredicted RBP13.12□□□□□ -0.31
LDB3-208ENST00000623007 MMDQ15546 238 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 AWAT1Q58HT5 328 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 C15orf54Q8N8G6 183 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 OR1L4Q8NGR5 311 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 GATAD1Q8WUU5 269 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 RPS10P5Q9NQ39 176 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 ITPR1Q14643 2758 aa13.12□□□□□ -0.31
LDB3-208ENST00000623007 NBASA2RRP1 2371 aa13.11□□□□□ -0.31
LDB3-208ENST00000623007 CGB1A6NKQ9 187 aa13.11□□□□□ -0.31
LDB3-208ENST00000623007 F6UZH7 168 aa13.11□□□□□ -0.31
LDB3-208ENST00000623007 ZFP36P26651 326 aaKnown RBP13.11□□□□□ -0.31
LDB3-208ENST00000623007 MRGPRG-AS1Q2M3A8 158 aa13.11□□□□□ -0.31
LDB3-208ENST00000623007 THAP8Q8NA92 274 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms