RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZNF660Q6AZW8 331 aaPredicted RBP7.41□□□□□ -1.22
HDAC9-229ENST00000622668 ORM1P02763 201 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 FOXB2Q5VYV0 432 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 ATP5SQ99766 215 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 MAP1LC3B2A6NCE7 125 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 TEX36Q5VZQ5 186 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 PRSS54Q6PEW0 395 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 MRAPQ8TCY5 172 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 CHRDL1Q9BU40 450 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 MAP1LC3BQ9GZQ8 125 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 V9GYH0 126 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 J3QRE1 110 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 OR2C1O95371 312 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 AMY1AP04745 511 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 HMGN3Q15651 99 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 TMEM177Q53S58 311 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 NHLRC3Q5JS37 347 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 SELENOHQ8IZQ5 122 aaKnown RBP7.41□□□□□ -1.22
HDAC9-229ENST00000622668 RXFP4Q8TDU9 374 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 FOXC2Q99958 501 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 GPR61Q9BZJ8 451 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 C5orf66Q9H5L9 145 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 JKAMPQ9P055 326 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 UFC1Q9Y3C8 167 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 DBX1A6NMT0 343 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 UPK2O00526 184 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 UCP3P55916 312 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 PAX5Q02548 391 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 NABP2Q9BQ15 211 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 RAMP3O60896 148 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 ZNF737O75373 536 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 VENTXO95231 258 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 ZFP36P26651 326 aaKnown RBP7.4□□□□□ -1.22
HDAC9-229ENST00000622668 FGF8P55075 233 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-229ENST00000622668 RPL7L1Q6DKI1 246 aaKnown RBP7.4□□□□□ -1.22
HDAC9-229ENST00000622668 STHQ8IWL8 128 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 IGFBPL1Q8WX77 278 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 NIPSNAP3BQ9BS92 247 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 RSG1Q9BU20 258 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 KAAG1Q9UBP8 84 aa7.4□□□□□ -1.22
HDAC9-229ENST00000622668 ATRQ13535 2644 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 IGKV1D-8A0A087WSZ0 117 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 OR4C46A6NHA9 309 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF727A8MUV8 499 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 G3V318 75 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 SIAH2O43255 324 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 SYNJ2BPP57105 145 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 LINC00205P59089 165 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 PAX8Q06710 450 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 PRSS8Q16651 343 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 PRSS57Q6UWY2 283 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 FAM89BQ8N5H3 189 aa7.4□□□□□ -1.23
HDAC9-229ENST00000622668 TEP1Q99973 2627 aaKnown RBP7.4□□□□□ -1.23
HDAC9-229ENST00000622668 GGCTO75223 188 aaKnown RBP7.39□□□□□ -1.23
HDAC9-229ENST00000622668 EWSR1Q01844 656 aaKnown RBP eCLIP7.39□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF79Q15937 498 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 OR51G1Q8NGK1 321 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 SMR3AQ99954 134 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 PAXXQ9BUH6 204 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 RPS10P5Q9NQ39 176 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 TMA7Q9Y2S6 64 aaKnown RBP7.39□□□□□ -1.23
HDAC9-229ENST00000622668 PXMP4Q9Y6I8 212 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 DYSFO75923 2080 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 TMSB15BA0A087X1C1 80 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 A0A0A6YYD4 124 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 SEC14L6B5MCN3 397 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 PAX1P15863 534 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 S100A2P29034 98 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 AKR1D1P51857 326 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 SRSF2Q01130 221 aaKnown RBP7.39□□□□□ -1.23
HDAC9-229ENST00000622668 CD69Q07108 199 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 MSMPQ1L6U9 139 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 MIC13Q5XKP0 118 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 MLXQ9UH92 298 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 TRAV14DV4A0A0A6YYC5 116 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 MMP23AO75900 390 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 CFDP00746 253 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-229ENST00000622668 FAM157CP0CG43 387 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 RAB9AP51151 201 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 OR10W1Q8NGF6 305 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 MGAM2Q2M2H8 2515 aa7.39□□□□□ -1.23
HDAC9-229ENST00000622668 P2RY1P47900 373 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 TMEM252Q8N6L7 170 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 TMEM167BQ9NRX6 74 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 A0A1B0GUS0 222 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 ATP6V0E1O15342 81 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 MAS1LP35410 378 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 NHLH2Q02577 135 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 PJVKQ0ZLH3 352 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 RNF166Q96A37 237 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-229ENST00000622668 SIGLEC9Q9Y336 463 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 CENPVL3A0A0U1RRI6 287 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 UMAD1C9J7I0 102 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 E9PQ18 207 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 RGS13O14921 159 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 ZNF735P0CB33 412 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 SUMO1P63165 101 aaKnown RBP7.38□□□□□ -1.23
HDAC9-229ENST00000622668 TMEM95Q3KNT9 176 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 NECAP1Q8NC96 275 aa7.38□□□□□ -1.23
HDAC9-229ENST00000622668 SMIM7Q9BQ49 75 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms