RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 FABP6P51161 128 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 GAGE5Q13069 117 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 GAGE6Q13070 117 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 FAM162BQ5T6X4 162 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 TPRX1Q8N7U7 411 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 SAP25Q8TEE9 199 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 C11orf52Q96A22 123 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 NABP1Q96AH0 204 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 NPCDR1Q9BY65 106 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 OCIAD1Q9NX40 245 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 CACNG5Q9UF02 275 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 RIF1Q5UIP0 2472 aaKnown RBP8.61□□□□□ -1.03
VPS11-207ENST00000620429 TRGV10A0A0A0MS01 117 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 CD300LBA8K4G0 201 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 APOA2P02652 100 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 ADAMTSL5Q6ZMM2 481 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 LHFPL2Q6ZUX7 228 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 TMEM251Q8N6I4 163 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 NEU4Q8WWR8 484 aaPredicted RBP8.61□□□□□ -1.03
VPS11-207ENST00000620429 OSTCQ9NRP0 149 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 EML6Q6ZMW3 1958 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 PGLYRP1O75594 196 aaPredicted RBP8.6□□□□□ -1.03
VPS11-207ENST00000620429 TUSC2O75896 110 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 CFIP05156 583 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 OR9G9P0C7N8 305 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 UQCRFS1P47985 274 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 C10orf128Q5T292 105 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 SPTBN4Q9H254 2564 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 KIAA1549Q9HCM3 1950 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 SMIM27A0A1W2PRY6 76 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 FAM90A26D6RGX4 464 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 SPINK4O60575 86 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 RNASEKQ6P5S7 137 aaKnown RBP8.6□□□□□ -1.03
VPS11-207ENST00000620429 DOLPP1Q86YN1 238 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 ZDHHC23Q8IYP9 409 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 RNF138Q8WVD3 245 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 RNF183Q96D59 192 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 ZNF837Q96EG3 531 aaPredicted RBP8.6□□□□□ -1.03
VPS11-207ENST00000620429 C19orf24Q9BVV8 132 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 CCL28Q9NRJ3 127 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 IGLV3-12A0A075B6K2 115 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 IGLV3-32A0A0A0MS00 114 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 IGKV1D-13A0A0B4J2D9 117 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 LRRC30A6NM36 301 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 F8W1H4 67 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 IGKV1-13P0DP09 117 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 VWC2Q2TAL6 325 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 PMS2CLQ68D20 193 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 OR1L1Q8NH94 360 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 TMEM54Q969K7 222 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 ABHD17AQ96GS6 310 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 SPAG8Q99932 426 aaPredicted RBP8.6□□□□□ -1.03
VPS11-207ENST00000620429 SERTAD4Q9NUC0 356 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 CLCF1Q9UBD9 225 aa8.6□□□□□ -1.03
VPS11-207ENST00000620429 A0A1B0GW15 77 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 PSG2P11465 335 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 RBM11P57052 281 aaKnown RBP8.59□□□□□ -1.03
VPS11-207ENST00000620429 RPL31P62899 125 aaKnown RBP8.59□□□□□ -1.03
VPS11-207ENST00000620429 NRN1LQ496H8 165 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 SDK2Q58EX2 2172 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 UCN2Q96RP3 112 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 NAA38Q9BRA0 125 aaKnown RBP8.59□□□□□ -1.03
VPS11-207ENST00000620429 SIGLEC8Q9NYZ4 499 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 OR2W1Q9Y3N9 320 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 IZUMO1RA6ND01 250 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 OR2J3O76001 311 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 CELA2AP08217 269 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 FAM87AP0C7U9 286 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 TFF3Q07654 80 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 AESQ08117 197 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 FOXE3Q13461 319 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 IZUMO4Q1ZYL8 232 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 ZNF718Q3SXZ3 478 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 TTC9CQ8N5M4 171 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 GCSAMQ8N6F7 178 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 PIGCQ92535 297 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 GRAMD2BQ96HH9 432 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 VGLL1Q99990 258 aa8.59□□□□□ -1.03
VPS11-207ENST00000620429 ZNF331Q9NQX6 463 aaPredicted RBP8.59□□□□□ -1.03
VPS11-207ENST00000620429 TNRC6AQ8NDV7 1962 aaKnown RBP8.58□□□□□ -1.04
VPS11-207ENST00000620429 PMS2P5A8MQ11 134 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 ZFAND5O76080 213 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 DEFA4P12838 97 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 CRYGSP22914 178 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 TIMM23BQ5SRD1 257 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 FOXL2NBQ6ZUU3 175 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 OR4A16Q8NH70 328 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 OR10D3Q8NH80 312 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 H1FXQ92522 213 aaKnown RBP8.58□□□□□ -1.04
VPS11-207ENST00000620429 URB1-AS1Q96HZ7 61 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 RAX2Q96IS3 184 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 HINT2Q9BX68 163 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 TNRC6BQ9UPQ9 1833 aaKnown RBP8.58□□□□□ -1.04
VPS11-207ENST00000620429 ZNF407Q9C0G0 2248 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 SCTP09683 121 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 PATE4P0C8F1 98 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms