RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TMEM249	Q2WGJ8	235 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	MOB3B	Q86TA1	216 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	C19orf67	A6NJJ6	358 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	OR7C2	O60412	319 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	OR10J4	P0C629	311 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	OPRK1	P41145	380 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	KLF3	P57682	345 aa	Predicted RBP	11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	RAB31	Q13636	194 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	TEPP	Q6URK8	271 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	TCTEX1D1	Q8N7M0	179 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	SERTAD4	Q9NUC0	356 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	ZNRD1	Q9P1U0	126 aa		11.92	□□□□□ -0.5
SMTN-223	ENST00000619644	SP9	P0CG40	484 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	GCHFR	P30047	84 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	RELB	Q01201	579 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	PSG5	Q15238	335 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	SLC24A4	Q8NFF2	622 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	RND1	Q92730	232 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	CALY	Q9NYX4	217 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	PROCR	Q9UNN8	238 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	MGST3	O14880	152 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	ZNF253	O75346	499 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	CA2	P00918	260 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	ZNF883	P0CG24	379 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	STAG3L2	P0CL84	134 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	STAG3L3	P0CL85	134 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	EFNB3	Q15768	340 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	RPEL1	Q2QD12	228 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	MMD2	Q8IY49	270 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	ST6GALNAC3	Q8NDV1	305 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	PRR7	Q8TB68	274 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	ITLN1	Q8WWA0	313 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	RCHY1	Q96PM5	261 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	UHRF2	Q96PU4	802 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	PLEKHA3	Q9HB20	300 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	ABCA1	O95477	2261 aa		11.91	□□□□□ -0.5
SMTN-223	ENST00000619644	HTD2	P86397	168 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	FXYD3	Q14802	87 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	KIAA1644	Q3SXP7	199 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	ASPHD1	Q5U4P2	390 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	UNQ5815/PRO19632	Q6UWF5	114 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	MIR17HG	Q75NE6	70 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	OR8I2	Q8N0Y5	310 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	GCSAM	Q8N6F7	178 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	OR4S2	Q8NH73	311 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	WNT10A	Q9GZT5	417 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	MPDU1	O75352	247 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	MGST1	P10620	155 aa	Known RBP	11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	HINT1	P49773	126 aa	Predicted RBP	11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	RHOB	P62745	196 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	KCNS1	Q96KK3	526 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	TXNDC17	Q9BRA2	123 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	NAT8B	Q9UHF3	227 aa		11.9	□□□□□ -0.5
SMTN-223	ENST00000619644	RIF1	Q5UIP0	2472 aa	Known RBP	11.9	□□□□□ -0.5
SMTN-223	ENST00000619644		A8MXE2	369 aa		11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	ITGB1BP1	O14713	200 aa		11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	CEACAM8	P31997	349 aa	Predicted RBP	11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	MSMP	Q1L6U9	139 aa		11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	OR4A47	Q6IF82	309 aa		11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	DOLPP1	Q86YN1	238 aa		11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	SFXN3	Q9BWM7	321 aa		11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	IFI27L2	Q9H2X8	130 aa		11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	JPT1	Q9UK76	154 aa		11.9	□□□□□ -0.51
SMTN-223	ENST00000619644	SAA2-SAA4	A0A096LPE2	208 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644		A0A1W2PS18	150 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	MMP23A	O75900	390 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	SAA2	P0DJI9	122 aa	Predicted RBP	11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	CRYBB3	P26998	211 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	VDAC2	P45880	294 aa	Predicted RBP	11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	SARAF	Q96BY9	339 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	DMXL2	Q8TDJ6	3036 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	MT-CO2	P00403	227 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	IGHV3-48	P01763	117 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	UBE2V1	Q13404	147 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	MLANA	Q16655	118 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	DEFB109B	Q30KR1	87 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	ATOH7	Q8N100	152 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	GNB1L	Q9BYB4	327 aa		11.89	□□□□□ -0.51
SMTN-223	ENST00000619644	TRBV9	A0A0B4J1U6	114 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	C3orf79	P0CE67	100 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	TRAT1	Q6PIZ9	186 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	NHLRC2	Q8NBF2	726 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	CDKN1B	P46527	198 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	CT45A1	Q5HYN5	189 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	CT45A3	Q8NHU0	189 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	SNRNP40	Q96DI7	357 aa	Known RBP	11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	COX11	Q9Y6N1	276 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644		V9GYV3	84 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	PIEZO2	Q9H5I5	2752 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	SRRM5	B3KS81	715 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	TOMM40	O96008	361 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	PQLC2	Q6ZP29	291 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	CCL13	Q99616	98 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	RNASE7	Q9H1E1	156 aa	Known RBP	11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	OR51B2	Q9Y5P1	312 aa		11.88	□□□□□ -0.51
SMTN-223	ENST00000619644	DMXL1	Q9Y485	3027 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms