RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 PROCRQ9UNN8 238 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 SLC25A15Q9Y619 301 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 GGTLC3B5MD39 225 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 FNDC10F2Z333 226 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 J3QR06 171 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 OR7C2O60412 319 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 OR10J4P0C629 311 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 STARD4Q96DR4 205 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 FAM103A1Q9BTL3 118 aaKnown RBP16.68■□□□□ 0.26
NEK3-208ENST00000618534 VAMP8Q9BV40 100 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 FBXL7Q9UJT9 491 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 LHBP01229 141 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 SP9P0CG40 484 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 IRF2P14316 349 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 TCL1AP56279 114 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 CX3CL1P78423 397 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 KIAA1644Q3SXP7 199 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 VHLLQ6RSH7 139 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 C1orf174Q8IYL3 243 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 TECRQ9NZ01 308 aaKnown RBP16.68■□□□□ 0.26
NEK3-208ENST00000618534 TNCP24821 2201 aa16.68■□□□□ 0.26
NEK3-208ENST00000618534 ZNF25P17030 456 aaPredicted RBP16.67■□□□□ 0.26
NEK3-208ENST00000618534 PLA2G2CQ5R387 149 aa16.67■□□□□ 0.26
NEK3-208ENST00000618534 ZNF439Q8NDP4 499 aa16.67■□□□□ 0.26
NEK3-208ENST00000618534 SARAFQ96BY9 339 aa16.67■□□□□ 0.26
NEK3-208ENST00000618534 PRNDQ9UKY0 176 aa16.67■□□□□ 0.26
NEK3-208ENST00000618534 PRCDQ00LT1 54 aa16.67■□□□□ 0.26
NEK3-208ENST00000618534 POU2AF1Q16633 256 aa16.67■□□□□ 0.26
NEK3-208ENST00000618534 TMEM136Q6ZRR5 245 aa16.67■□□□□ 0.26
NEK3-208ENST00000618534 SIGLECL1Q8N7X8 197 aa16.67■□□□□ 0.26
NEK3-208ENST00000618534 COLQQ9Y215 455 aaPredicted RBP16.67■□□□□ 0.26
NEK3-208ENST00000618534 TANC2Q9HCD6 1990 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 A6NNC1 897 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 M0QZK8 103 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 TIGITQ495A1 244 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 ADTRPQ96IZ2 230 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 GCM1Q9NP62 436 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 OSTCQ9NRP0 149 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 DKK4Q9UBT3 224 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 M0R1B8 84 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 IGKV1-16P04430 117 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 RPLP1P05386 114 aaKnown RBP16.66■□□□□ 0.26
NEK3-208ENST00000618534 GPX1P07203 203 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 MLANAQ16655 118 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 ZNRD1Q9P1U0 126 aa16.66■□□□□ 0.26
NEK3-208ENST00000618534 SRRM4A7MD48 611 aaKnown RBP16.65■□□□□ 0.26
NEK3-208ENST00000618534 UPK2O00526 184 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 KRTDAPP60985 99 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 SLC35E1Q96K37 410 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 MMP23AO75900 390 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 IGLV2-8P01709 118 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 MT-ND6P03923 174 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 BRS3P32247 399 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 KLF3P57682 345 aaPredicted RBP16.65■□□□□ 0.26
NEK3-208ENST00000618534 SUMO1P63165 101 aaKnown RBP16.65■□□□□ 0.26
NEK3-208ENST00000618534 WDR73Q6P4I2 378 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 MRPL52Q86TS9 123 aaKnown RBP16.65■□□□□ 0.26
NEK3-208ENST00000618534 OR9G1Q8NH87 305 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 RCHY1Q96PM5 261 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 RAB9BQ9NP90 201 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 ZNF257Q9Y2Q1 563 aa16.65■□□□□ 0.26
NEK3-208ENST00000618534 TBL2Q9Y4P3 447 aaKnown RBP16.65■□□□□ 0.26
NEK3-208ENST00000618534 OR5G3P0C626 314 aa16.64■□□□□ 0.25
NEK3-208ENST00000618534 Q8N976 141 aa16.64■□□□□ 0.25
NEK3-208ENST00000618534 DEFB108BQ8NET1 73 aa16.64■□□□□ 0.25
NEK3-208ENST00000618534 NCOR1P1Q9H4R4 102 aa16.64■□□□□ 0.25
NEK3-208ENST00000618534 TEX50A0A1B0GTY4 177 aa16.64■□□□□ 0.25
NEK3-208ENST00000618534 MGST1P10620 155 aaKnown RBP16.64■□□□□ 0.25
NEK3-208ENST00000618534 MRPL54Q6P161 138 aaKnown RBP16.64■□□□□ 0.25
NEK3-208ENST00000618534 ZNF586Q9NXT0 402 aa16.64■□□□□ 0.25
NEK3-208ENST00000618534 SVILO95425 2214 aa16.63■□□□□ 0.25
NEK3-208ENST00000618534 RAI1Q7Z5J4 1906 aaPredicted RBP16.63■□□□□ 0.25
NEK3-208ENST00000618534 CT45A6P0DMU7 189 aa16.63■□□□□ 0.25
NEK3-208ENST00000618534 CT45A5P0DMU8 189 aa16.63■□□□□ 0.25
NEK3-208ENST00000618534 CT45A7P0DMV0 189 aa16.63■□□□□ 0.25
NEK3-208ENST00000618534 RPL19P84098 196 aaKnown RBP16.63■□□□□ 0.25
NEK3-208ENST00000618534 FAM169BQ8N8A8 192 aa16.63■□□□□ 0.25
NEK3-208ENST00000618534 IGF2BP2-AS1Q96M15 143 aa16.63■□□□□ 0.25
NEK3-208ENST00000618534 SLC35D1Q9NTN3 355 aa16.63■□□□□ 0.25
NEK3-208ENST00000618534 ISLRO14498 428 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 AMTP48728 403 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 IBA57Q5T440 356 aaKnown RBP16.62■□□□□ 0.25
NEK3-208ENST00000618534 SEM1Q6ZVN7 128 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 PMCHP20382 165 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 TAS2R45P59539 299 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 OR10J3Q5JRS4 329 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 ASPHD1Q5U4P2 390 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 OR10W1Q8NGF6 305 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 FAM222BQ8WU58 562 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 KCNS1Q96KK3 526 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 NRN1Q9NPD7 142 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 PCNX2A6NKB5 2137 aa16.62■□□□□ 0.25
NEK3-208ENST00000618534 TRAV17A0A0B4J275 112 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 DIRC3C9JPN6 131 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 BMPR1BO00238 502 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 AMY1AP04745 511 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 RNASE2P10153 161 aaKnown RBP16.61■□□□□ 0.25
NEK3-208ENST00000618534 C2orf83Q53S99 150 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 MORN5Q5VZ52 161 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 STUMQ69YW2 141 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms