RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TMEM89A2RUT3 159 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 RNF222A6NCQ9 220 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 PLA2G1BP04054 148 aaKnown RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 MFAP2P55001 183 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 DLK1P80370 383 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 INSL4Q14641 139 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 C10orf105Q8TEF2 133 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SRSF8Q9BRL6 282 aaKnown RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 ISG20L2Q9H9L3 353 aaKnown RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 TRBV25-1A0A075B6N4 114 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 NAPSAO96009 420 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 BGLAPP02818 100 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 CFHR2P36980 270 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 ERASQ7Z444 233 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SRXN1Q9BYN0 137 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 EMCNQ9ULC0 261 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 H3BMH7 237 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 GCM2O75603 506 aaPredicted RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 AANATQ16613 207 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 RFLNAQ6ZTI6 216 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 KCNRGQ8N5I3 272 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TOLLIPQ9H0E2 274 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 CLDN16Q9Y5I7 305 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 OIP5O43482 229 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 SYT11Q9BT88 431 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 MIXL1Q9H2W2 232 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 IL4P05112 153 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 EFNB2P52799 333 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TCF24Q7RTU0 167 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SPAG8Q99932 426 aaPredicted RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 CHCHD2Q9Y6H1 151 aaPredicted RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 NEURL1O76050 574 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 ATG4DQ86TL0 474 aaPredicted RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 LRTM2Q8N967 370 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SNRNP200O75643 2136 aaKnown RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 NACAE9PAV3 2078 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TRGV1A0A0A0MS02 117 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TRAV25A0A0B4J276 109 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 A0A1B0GW64 132 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 J3KTA2 159 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 RRHO14718 337 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 C21orf62-AS1Q17RA5 79 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 C5orf64Q2M2E5 130 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TMEM236Q5W0B7 351 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 C11orf68Q9H3H3 251 aaKnown RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 TCRBV7S3A2A0A539 114 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 FOXS1O43638 330 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 ZNF90Q03938 601 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 UQCC3Q6UW78 93 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 PRSS48Q7RTY5 328 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TCF19Q9Y242 345 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SOX21Q9Y651 276 aaPredicted RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 OR10J1P30954 320 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 PSMG4Q5JS54 123 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 IMMP1LQ96LU5 166 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 DSCR8Q96T75 97 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 CCL24O00175 119 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 RS1O15537 224 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 CD7P09564 240 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 TNFRSF1BP20333 461 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 PSG6Q00889 435 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 ZNF683Q8IZ20 524 aa2.78□□□□□ -1.97
LPP-220ENST00000617246 RNASE1P07998 156 aaKnown RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 IGF2BP2-AS1Q96M15 143 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 C1QTNF5Q9BXJ0 243 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 SLC25A32Q9H2D1 315 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 ENDOGQ14249 297 aaKnown RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 PIP4P2Q8N4L2 257 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 TOMM7Q9P0U1 55 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 F6UB75 175 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 ALX4Q9H161 411 aaPredicted RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 ZIC1Q15915 447 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 FLVCR2Q9UPI3 526 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 M0R3E3 92 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 PLPP2O43688 288 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 VN1R4Q7Z5H5 301 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 OR4D11Q8NGI4 311 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 PQLC2LA1A4F0 135 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 FOXE3Q13461 319 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 RUSC1-AS1Q66K80 236 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 CEND1Q8N111 149 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 ZNF705FA8MVS1 300 aaPredicted RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 RBFOX2O43251 390 aaKnown RBP eCLIP2.77□□□□□ -1.97
LPP-220ENST00000617246 ZNF705DP0CH99 300 aaPredicted RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 STAG3L2P0CL84 134 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 RHOGP84095 191 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 PRR30Q53SZ7 412 aaPredicted RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 MED13Q9UHV7 2174 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 TRIOBPQ9H2D6 2365 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 IGHV1-8P0DP01 117 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 PTTG1IPP53801 180 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 LGALS14Q8TCE9 139 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 FAM90A26D6RGX4 464 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 FBXL19-AS1Q494R0 122 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 WDR82Q6UXN9 313 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 CTDSP2O14595 271 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 FCN2Q15485 313 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 DHRS11Q6UWP2 260 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms