RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 ZNF79Q15937 498 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 SP6Q3SY56 376 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 PYDC2Q56P42 97 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 CLEC19AQ6UXS0 136 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 ZNF502Q8TBZ5 544 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 GLYATL2Q8WU03 294 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 TRIM63Q969Q1 353 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 B9D2Q9BPU9 175 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 NAA60Q9H7X0 242 aa11.79□□□□□ -0.52
SRGAP2C-205ENST00000617209 A0A0B4J293 547 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 MFSD2BA6NFX1 497 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 CRYM-AS1A6NIL9 109 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 PPP5D1E7EU14 171 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 INS-IGF2F8WCM5 200 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 OR2C1O95371 312 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 FAUP35544 74 aaKnown RBP11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 ARL3P36405 182 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 AKR1C2P52895 323 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 MFAP2P55001 183 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 KLF9Q13886 244 aaPredicted RBP11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 TRIM16LQ309B1 348 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 SPANXN2Q5MJ10 180 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 FAM219AQ8IW50 185 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 OR2C3Q8N628 320 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 OR1P1Q8NH06 330 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 RRNAD1Q96FB5 475 aaKnown RBP11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 GALNT14Q96FL9 552 aa11.78□□□□□ -0.52
SRGAP2C-205ENST00000617209 OR5AC1P0C628 307 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 GP9P14770 177 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 FAM106AQ4KMX7 169 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 AARDQ4LEZ3 155 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 TOMM5Q8N4H5 51 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 ZNF114Q8NC26 417 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 MCUBQ9NWR8 336 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 KCNIP3Q9Y2W7 256 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 TMEM56-RWDD3S4R434 201 aa11.77□□□□□ -0.53
SRGAP2C-205ENST00000617209 LY86O95711 162 aa11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 ERHP84090 104 aaKnown RBP11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 IZUMO4Q1ZYL8 232 aa11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 SGPP2Q8IWX5 399 aa11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 RBPMSQ93062 196 aaKnown RBP11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 SMAD5-AS1Q9Y6J3 95 aa11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 S4R3C0 116 aa11.76□□□□□ -0.53
SRGAP2C-205ENST00000617209 K7EIM0 57 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 HLA-AP01891 365 aaKnown RBP11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 SPSB3Q6PJ21 355 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 ADAMTSL5Q6ZMM2 481 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 SELENOHQ8IZQ5 122 aaKnown RBP11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 OR52E5Q8NH55 327 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 LHFPL5Q8TAF8 219 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 TMEM230Q96A57 120 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 SRRQ9GZT4 340 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 PLEKHA3Q9HB20 300 aa11.75□□□□□ -0.53
SRGAP2C-205ENST00000617209 C2orf70A6NJV1 201 aa11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 A8MWP6 167 aa11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 ST8SIA3O43173 380 aa11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 NHLRC4P0CG21 123 aaPredicted RBP11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 FCGR2BP31994 310 aaPredicted RBP11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 CD69Q07108 199 aa11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 PVRIGQ6DKI7 326 aa11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 PLET1Q6UQ28 207 aa11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 Q6ZRM9 215 aa11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 BSCL2Q96G97 398 aaPredicted RBP11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 SLC25A21Q9BQT8 299 aaPredicted RBP11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 GAR1Q9NY12 217 aaKnown RBP11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 C21orf62Q9NYP8 219 aa11.74□□□□□ -0.53
SRGAP2C-205ENST00000617209 PIGBOS1A0A0B4J2F0 54 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 A0A0G2JRQ6 117 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 TGOLN2O43493 480 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 IFNA17P01571 189 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 FOLR2P14207 255 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 CBLN1P23435 193 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 GPR183P32249 361 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 ELLP55199 621 aaPredicted RBP11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 SUPT4H1P63272 117 aaKnown RBP11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 TMEM187Q14656 261 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 TMEM268Q5VZI3 342 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 LCN12Q6JVE5 192 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 HAPLN4Q86UW8 402 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 Q8N1Y9 231 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 TXN2Q99757 166 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 PDCD10Q9BUL8 212 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 ZNF436Q9C0F3 470 aaPredicted RBP11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 TECRQ9NZ01 308 aaKnown RBP11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 CACFD1Q9UGQ2 172 aa11.73□□□□□ -0.53
SRGAP2C-205ENST00000617209 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
SRGAP2C-205ENST00000617209 I3L2K1 104 aa11.72□□□□□ -0.53
SRGAP2C-205ENST00000617209 SNCAP37840 140 aa11.72□□□□□ -0.53
SRGAP2C-205ENST00000617209 DEFB114Q30KQ6 69 aa11.72□□□□□ -0.53
SRGAP2C-205ENST00000617209 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
SRGAP2C-205ENST00000617209 RNASE11Q8TAA1 199 aaKnown RBP11.72□□□□□ -0.53
SRGAP2C-205ENST00000617209 MARC2Q969Z3 335 aa11.72□□□□□ -0.53
SRGAP2C-205ENST00000617209 PALMDQ9NP74 551 aa11.72□□□□□ -0.53
SRGAP2C-205ENST00000617209 A0A0B4J2A0 478 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms