RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 FOXL1Q12952 345 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 TEX45Q8NA69 505 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 SCGB3A1Q96QR1 104 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 SSBP4Q9BWG4 385 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 APOMO95445 188 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 CD55P08174 381 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 GCSAMLQ5JQS6 135 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 OR13A1Q8NGR1 328 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 DYNLRB2Q8TF09 96 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 NHP2Q9NX24 153 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 WDR83OSQ9Y284 106 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 CHCHD2Q9Y6H1 151 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 ANKRD36A6QL64 1941 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 IGKV1D-8A0A087WSZ0 117 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 A0A0A6YYD4 124 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 TMEM50AO95807 157 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 GATA2P23769 480 aaPredicted RBP8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 MEIG1Q5JSS6 88 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 RNFT1Q5M7Z0 435 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 RNASEH2CQ8TDP1 164 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 MRPS16Q9Y3D3 137 aaKnown RBP8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 NDUFS8O00217 210 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 NPPCP23582 126 aa8.97□□□□□ -0.97
CLTCL1-209ENST00000617103 LINC00271P0C7V0 271 aa8.96□□□□□ -0.97
CLTCL1-209ENST00000617103 TIMM23BQ5SRD1 257 aa8.96□□□□□ -0.97
CLTCL1-209ENST00000617103 PMS2CLQ68D20 193 aa8.96□□□□□ -0.97
CLTCL1-209ENST00000617103 NUDT11Q96G61 164 aa8.96□□□□□ -0.97
CLTCL1-209ENST00000617103 CLEC7AQ9BXN2 247 aa8.96□□□□□ -0.97
CLTCL1-209ENST00000617103 GVINP1Q7Z2Y8 2422 aa8.96□□□□□ -0.97
CLTCL1-209ENST00000617103 PF4V1P10720 104 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 MAFAQ8NHW3 353 aaPredicted RBP8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 PPIAL4CA0A0B4J2A2 164 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 PPIAL4GP0DN37 164 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 CTSSP25774 331 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 TIMP3P35625 211 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 RIPPLY3P57055 190 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 VSIRQ9H7M9 311 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 MST1P26927 711 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 SRSF4Q08170 494 aaKnown RBP8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 FER1L6-AS1Q8NA97 138 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 DDB2Q92466 427 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 GDF15Q99988 308 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 Q9H3A6 140 aa8.96□□□□□ -0.98
CLTCL1-209ENST00000617103 SDK2Q58EX2 2172 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 IGKV3D-15A0A087WSY6 115 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 IGKV3-15P01624 115 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 TSPOP30536 169 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 ZNF56Q15929 161 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 FAM74A4Q5TZK3 123 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 CDCP2Q5VXM1 449 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 MRPL52Q86TS9 123 aaKnown RBP8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 CHCHD1Q96BP2 118 aaKnown RBP8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 GP6Q9HCN6 339 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 MS4A6AQ9H2W1 248 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 ZNF703Q9H7S9 590 aaPredicted RBP8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 TDRD6O60522 2096 aaKnown RBP8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 MYOFQ9NZM1 2061 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 HBDP02042 147 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 SFTPCP11686 197 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 PLPPR1Q8TBJ4 325 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 ZNF837Q96EG3 531 aaPredicted RBP8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 ELOVL5Q9NYP7 299 aa8.95□□□□□ -0.98
CLTCL1-209ENST00000617103 MUC21A0A0G2JKD1 596 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 MUC21A0A140T8X8 626 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 TM4SF5O14894 197 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 ADCYAP1P18509 176 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 MUC21Q5SSG8 566 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 FAM159AQ6UWV7 190 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 Q6ZT83 130 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 LYZL4Q96KX0 146 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 LPAR2Q9HBW0 351 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 ZNF319Q9P2F9 582 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 UBE2L6O14933 153 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 HSD52Q0P140 79 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 EFNB3Q15768 340 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 SCN8AQ9UQD0 1980 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 IGHV3-35A0A0C4DH35 117 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 KBTBD11-OT1A0A1B0GTJ5 212 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 M0R381 172 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 LINC01551Q86U37 167 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 ZNF664Q8N3J9 261 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 WBP1Q96G27 269 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 EPDR1Q9UM22 224 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 MRAP2Q96G30 205 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 UBTD1Q9HAC8 227 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 OTORQ9NRC9 128 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 DEPPQ9NTK1 212 aa8.94□□□□□ -0.98
CLTCL1-209ENST00000617103 TRAV8-2A0A0B4J237 113 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 RFPL3SP0C7P2 107 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 FAM166AQ6J272 317 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 TMEM256Q8N2U0 113 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 TEX29Q8N6K0 151 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 TSKUQ8WUA8 353 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 TMEM262E9PQX1 116 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 TIAF1O95411 115 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 GLRXP35754 106 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 FAM106AQ4KMX7 169 aa8.93□□□□□ -0.98
CLTCL1-209ENST00000617103 ATP5L2Q7Z4Y8 100 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms