RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 MOSP00540 346 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 PPOXP50336 477 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 ECSCRQ19T08 205 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 OR8I2Q8N0Y5 310 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 GAFA1Q96PS6 74 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 PRO1933Q9H354 126 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 H3BTX0 84 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 IGFL2Q6UWQ7 119 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 SMIM15Q7Z3B0 74 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 FAM122AQ96E09 287 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 PGPA6NDG6 321 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 TMEM178BH3BS89 294 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 LINC00518Q8N0U6 118 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 NEUROG1Q92886 237 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 MALRD1Q5VYJ5 2156 aa10.89□□□□□ -0.67
PPP4R3B-206ENST00000616407 TRGC1P0CF51 173 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 TMEM200BQ69YZ2 307 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 HEPN1Q6WQI6 88 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 ZNF788Q6ZQV5 615 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 ZCCHC14Q8WYQ9 949 aaKnown RBP10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 SGK494Q96LW2 274 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 TUBA4BQ9H853 241 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 HIST1H1BP16401 226 aaKnown RBP10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 WDR73Q6P4I2 378 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.88□□□□□ -0.671e-9■■■■■ 73.7
PPP4R3B-206ENST00000616407 C20orf202A1L168 122 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 ZNF253O75346 499 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 MYOD1P15172 320 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 CEACAM8P31997 349 aaPredicted RBP10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 SRP14P37108 136 aaKnown RBP10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 TCF15Q12870 199 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 LY6DQ14210 128 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 NHLRC2Q8NBF2 726 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 NUP37Q8NFH4 326 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 OR10W1Q8NGF6 305 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 DKK4Q9UBT3 224 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 TRAV20A0A0B4J274 112 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 TREML4Q6UXN2 200 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 MIR17HGQ75NE6 70 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 TMEM144Q7Z5S9 345 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 TMEM133Q9H2Q1 129 aa10.88□□□□□ -0.67
PPP4R3B-206ENST00000616407 C1QTNF9BB2RNN3 333 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 COL8A1P27658 744 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 DUX4L9Q6RFH8 374 aaPredicted RBP10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 ZNF383Q8NA42 475 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 OR51M1Q9H341 326 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 DPM3Q9P2X0 92 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 SCO2A0A1W2PP80 73 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 COLCA2A8K830 154 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 FXYD3Q14802 87 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 C10orf55Q5SWW7 151 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 CRIP3Q6Q6R5 217 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 TOMM20LQ6UXN7 152 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 OR52E5Q8NH55 327 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 C19orf24Q9BVV8 132 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 RNF24Q9Y225 148 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 FAM90A9PA6NNJ1 464 aa10.87□□□□□ -0.67
PPP4R3B-206ENST00000616407 A0A087WWC5 75 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 P01737 135 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 RPL23P62829 140 aaKnown RBP10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 PRCDQ00LT1 54 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 RELBQ01201 579 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 C11orf53Q8IXP5 236 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 RBM14Q96PK6 669 aaKnown RBP10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 SRD5A3Q9H8P0 318 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 ZNRD1Q9P1U0 126 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 TRAV1-1A0A0B4J248 108 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 IBA57Q5T440 356 aaKnown RBP10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 SPSB3Q6PJ21 355 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 TXN2Q99757 166 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 VENTXO95231 258 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 AMTP48728 403 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 IQCJQ1A5X6 159 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 LYPD2Q6UXB3 125 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 SFRP2Q96HF1 295 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 TEX50A0A1B0GTY4 177 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 CDKN1AP38936 164 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 MFAP2P55001 183 aa10.86□□□□□ -0.67
PPP4R3B-206ENST00000616407 CREBBPQ92793 2442 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 ANKHD1Q8IWZ3 2542 aaKnown RBP10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 C15orf62A8K5M9 175 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 K7ENP7 123 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 CACNG8Q8WXS5 425 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 NUP210LQ5VU65 1888 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 HIST1H1EP10412 219 aaKnown RBP10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 RNASEKQ6P5S7 137 aaKnown RBP10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 LINC00305Q7Z4B0 112 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 GGTLC1Q9BX51 225 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 FAM106CPP0CH98 169 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 CD24P25063 80 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 CENPWQ5EE01 88 aa10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 NOL4LQ96MY1 436 aaPredicted RBP10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 SSBP3Q9BWW4 388 aaPredicted RBP10.85□□□□□ -0.67
PPP4R3B-206ENST00000616407 ARL3P36405 182 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 NBL1P41271 181 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 ZNF672Q499Z4 452 aaPredicted RBP10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 SSX7Q7RTT5 188 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 S4R3C0 116 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms