RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 BOD1L2Q8IYS8 172 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 ZNF524Q96C55 264 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 C12orf49Q9H741 205 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 DOCK7Q96N67 2140 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 ZNF716A6NP11 495 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 WISP1O95388 367 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 CELA3BP08861 270 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 FKBP2P26885 142 aaKnown RBP11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 FXYD7P58549 80 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 ZFAND6Q6FIF0 208 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 RNF114Q9Y508 228 aa11.36□□□□□ -0.59
PPP4R3B-205ENST00000616288 H7C2G1 150 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 MLNRO43193 412 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 ZIC4Q8N9L1 334 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 E9PLN8 166 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 IGHV3-48P01763 117 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 WNT2P09544 360 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 TMEM249Q2WGJ8 235 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 PRNTQ86SH4 94 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 WDR83OSQ9Y284 106 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 IL4P05112 153 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 C8orf88P0DMB2 117 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 SH2D6Q7Z4S9 175 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 ARPC1AQ92747 370 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 PHF7Q9BWX1 381 aaPredicted RBP11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 OR2H1Q9GZK4 316 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 RABAC1Q9UI14 185 aa11.35□□□□□ -0.59
PPP4R3B-205ENST00000616288 TRGV10A0A0A0MS01 117 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 A0A1W2PPM0 123 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 CCL1P22362 96 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 EMP1P54849 157 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 EFNB3Q15768 340 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 PNRC2Q9NPJ4 139 aaKnown RBP11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 ENSAO43768 121 aaKnown RBP11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 RPL7P18124 248 aaKnown RBP11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 C10orf113Q5VZT2 155 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 C3orf80F5H4A9 247 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 SCRG1O75711 98 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 IGFBP7Q16270 282 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 TMEM196Q5HYL7 178 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 LCNL1Q6ZST4 164 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 NPFFR1Q9GZQ6 430 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 OCIAD1Q9NX40 245 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 KIAA1549Q9HCM3 1950 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 TIMM8AO60220 97 aaPredicted RBP11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 RHOGP84095 191 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 LYPD6Q86Y78 171 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 TTC9CQ8N5M4 171 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 SRSF12Q8WXF0 261 aaKnown RBP11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 ZNF837Q96EG3 531 aaPredicted RBP11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
PPP4R3B-205ENST00000616288 TRAV5A0A0B4J249 113 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 PPIFP30405 207 aaKnown RBP11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 SYT8Q8NBV8 401 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 TMEM160Q9NX00 188 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 UFC1Q9Y3C8 167 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 USF3Q68DE3 2245 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 INTS1Q8N201 2190 aaKnown RBP11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 hADV38S2A0JD32 116 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 SRSF7Q16629 238 aaKnown RBP eCLIP11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 AMTNQ6UX39 209 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 ZNF645Q8N7E2 425 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 NUP35Q8NFH5 326 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 PSMB11A5LHX3 300 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 YPEL1O60688 119 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 LILRA6Q6PI73 481 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 SPACA3Q8IXA5 215 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 SNRNP40Q96DI7 357 aaKnown RBP11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 YPEL2Q96QA6 119 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 MRPL13Q9BYD1 178 aaKnown RBP11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 FSCN3Q9NQT6 498 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 WNK2Q9Y3S1 2297 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 COL4A3Q01955 1670 aa11.33□□□□□ -0.6
PPP4R3B-205ENST00000616288 C9JCJ5 164 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 SMIM17P0DL12 118 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 CTRLP40313 264 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 ABHD17BQ5VST6 288 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 ZBTB34Q8NCN2 500 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 LINC00479Q96M42 142 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 TP53TG3Q9ULZ0 132 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 MMP17Q9ULZ9 603 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 V9GYV3 84 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 H3BMG7 143 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 SSR4P51571 173 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 A0A1W2PRD5 423 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 A0A1W2PRF3 423 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 A0A1W2PRM7 423 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 SCGB1A1P11684 91 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 GABRG2P18507 467 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 CKS2P33552 79 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 SUB1P53999 127 aaKnown RBP eCLIP11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 PLGLAQ15195 96 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 GAGE2EQ4V326 116 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 OR9G4Q8NGQ1 327 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms