RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 ARHGAP5-AS1Q96IT6 56 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 UHRF2Q96PU4 802 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 DERL3Q96Q80 235 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 SLC29A1Q99808 456 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 PECRQ9BY49 303 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 BET1LQ9NYM9 111 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 FAM30AQ9NZY2 134 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 HSF4Q9ULV5 492 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 MRPS7Q9Y2R9 242 aaKnown RBP4.72□□□□□ -1.65
MUC1-227ENST00000615517 PRELID3BQ9Y3B1 194 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 A0A087WTM6 91 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 LOC102723971A0A1B0GUV8 181 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 EIF4EP06730 217 aaKnown RBP4.71□□□□□ -1.66
MUC1-227ENST00000615517 P0C879 139 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 CD37P11049 281 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 GNB3P16520 340 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 TAS2R43P59537 309 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 KRTAP10-4P60372 401 aaPredicted RBP4.71□□□□□ -1.66
MUC1-227ENST00000615517 ERVFC1-1P60608 527 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 HSP90B2PQ58FF3 399 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 YIF1BQ5BJH7 314 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 PSMG4Q5JS54 123 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 C1orf100Q5SVJ3 147 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 AMIGO2Q86SJ2 522 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 GPHA2Q96T91 129 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 UPK3BQ9BT76 320 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 TMEM70Q9BUB7 260 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 QTRT1Q9BXR0 403 aaKnown RBP4.71□□□□□ -1.66
MUC1-227ENST00000615517 MRPS18AQ9NVS2 196 aaKnown RBP4.71□□□□□ -1.66
MUC1-227ENST00000615517 ZNF446Q9NWS9 450 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 BABAM2Q9NXR7 383 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 KCNK7Q9Y2U2 307 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 RBMX2Q9Y388 322 aaKnown RBP4.71□□□□□ -1.66
MUC1-227ENST00000615517 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
MUC1-227ENST00000615517 F11RQ9Y624 299 aaKnown RBP4.71□□□□□ -1.66
MUC1-227ENST00000615517 IGKV1D-8A0A087WSZ0 117 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 IGKV1D-13A0A0B4J2D9 117 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 TEX50A0A1B0GTY4 177 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 SAC3D1A6NKF1 404 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 SNTNA6NMZ2 147 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 F5H768 121 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 UPK2O00526 184 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 DIRAS3O95661 229 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 HRASP01112 189 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 IGHV3-48P01763 117 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 CDK1P06493 297 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 FCGR3AP08637 254 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 IGKV1-13P0DP09 117 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 GNRHRP30968 328 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 ALDH3B2P48448 385 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 NUTF2P61970 127 aaKnown RBP4.7□□□□□ -1.66
MUC1-227ENST00000615517 FLOT2Q14254 428 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 CLINT1Q14677 625 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 GDF5OSQ5U4N7 250 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 C1orf158Q8N1D5 194 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 TCTEX1D2Q8WW35 142 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 GINS4Q9BRT9 223 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 GINS3Q9BRX5 216 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 FAM107BQ9H098 131 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 FNDC4Q9H6D8 234 aaPredicted RBP4.7□□□□□ -1.66
MUC1-227ENST00000615517 HRASLSQ9HDD0 168 aa4.7□□□□□ -1.66
MUC1-227ENST00000615517 A0A1B0GU03 582 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 HELTA6NFD8 242 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 I3L2K1 104 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 CYB5BO43169 146 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 HLA-DQB1P01920 261 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 PRM2P04554 102 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 DCKP27707 260 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 ASIPP42127 132 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 P2RY1P47900 373 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 MFAP4P55083 255 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 DEFB1P60022 68 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 DHRS2Q13268 280 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 INSL4Q14641 139 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 ESRGQ1W209 222 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 OGFRL1Q5TC84 451 aaPredicted RBP4.69□□□□□ -1.66
MUC1-227ENST00000615517 ZNF709Q8N972 641 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 ZNF485Q8NCK3 441 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 SLC25A46Q96AG3 418 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 COMMD5Q9GZQ3 224 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 FGF20Q9NP95 211 aaPredicted RBP4.69□□□□□ -1.66
MUC1-227ENST00000615517 CLEC2DQ9UHP7 191 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 SPATA2Q9UM82 520 aa4.69□□□□□ -1.66
MUC1-227ENST00000615517 PNMA8CA0A1B0GUJ8 204 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 BPNT1O95861 308 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 IGKV3-20P01619 116 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 TRAPPC2P0DI81 140 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 TRAPPC2BP0DI82 140 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 DEFB130BP0DP73 79 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 DEFB130AP0DP74 79 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 PRB4P10163 310 aaPredicted RBP4.68□□□□□ -1.66
MUC1-227ENST00000615517 HLA-DRB4P13762 266 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 CD36P16671 472 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 RCN1Q15293 331 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 FCN2Q15485 313 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 SSX1Q16384 188 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 POU2AF1Q16633 256 aa4.68□□□□□ -1.66
MUC1-227ENST00000615517 ZIK1Q3SY52 487 aaPredicted RBP4.68□□□□□ -1.66
MUC1-227ENST00000615517 RNASE12Q5GAN4 147 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms