RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ZP1P60852 638 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 ORMDL3Q8N138 153 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 C10orf126Q8N4M7 172 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 BEND2Q8NDZ0 799 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 FAM57AQ8TBR7 257 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 REPIN1Q9BWE0 567 aaKnown RBP3.86□□□□□ -1.79
CHD9-221ENST00000615216 A0A0G2JK05 382 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 SRP19P09132 144 aaKnown RBP3.86□□□□□ -1.79
CHD9-221ENST00000615216 TFF3Q07654 80 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 WDR82Q6UXN9 313 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 DOCK8Q8NF50 2099 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 LEAP2Q969E1 77 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 DPM3Q9P2X0 92 aa3.86□□□□□ -1.79
CHD9-221ENST00000615216 A0A1B0GV72 72 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 GRIFINA4D1Z8 144 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 YPEL1O60688 119 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 NBEAP1P0C6P0 100 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 CECR9P0C854 216 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 FHITP49789 147 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 BSPH1Q075Z2 132 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 FAM74A4Q5TZK3 123 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 LAIR2Q6ISS4 152 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 ZIC4Q8N9L1 334 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 YPEL2Q96QA6 119 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 FOXJ2Q9P0K8 574 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 PEMTQ9UBM1 199 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 SUMO2P61956 95 aaKnown RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 PPP1R27Q86WC6 154 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 SCGB3A1Q96QR1 104 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 GDF15Q99988 308 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 SLC50A1Q9BRV3 221 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 Q9H3A6 140 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 C21orf62Q9NYP8 219 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 SEMA5BQ9P283 1151 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 A0A1B0GTI1 187 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 C15orf61A6NNL5 157 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 C12orf77C9JDV5 145 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 GCSAMLQ5JQS6 135 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 OR52E5Q8NH55 327 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 LINC01549A6NIU2 74 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 ZIC3O60481 467 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 HOXA5P20719 270 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 RPRMQ9NS64 109 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 CBLN4Q9NTU7 201 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 TMEM160Q9NX00 188 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 SCO2A0A1W2PP80 73 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 MYOD1P15172 320 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 ICAM4Q14773 271 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 OR10J3Q5JRS4 329 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 CENPVQ7Z7K6 275 aaPredicted RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 FBXL7Q9UJT9 491 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 PF4P02776 101 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 MESP2Q0VG99 397 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 YAE1D1Q9NRH1 226 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 RBMY1BA6NDE4 496 aaKnown RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 RBMY1EA6NEQ0 496 aaKnown RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 APOHP02749 345 aaPredicted RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 RBMY1DP0C7P1 496 aaKnown RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 RBMY1A1P0DJD3 496 aaKnown RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 RBMY1CP0DJD4 496 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 EMP1P54849 157 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 LOC102724200A0A096LPH7 203 aaPredicted RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 TRBV6-7A0A0A0MS04 114 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 A0A1B0GV90 55 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 A0A1B0GW64 132 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 CGAP01215 116 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 IGKV1D-33P01593 117 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 IGKV1-33P01594 117 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 RNASE1P07998 156 aaKnown RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 FER1L6-AS1Q8NA97 138 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 OR4X2Q8NGF9 303 aa3.85□□□□□ -1.79
CHD9-221ENST00000615216 CHCHD1Q96BP2 118 aaKnown RBP3.85□□□□□ -1.79
CHD9-221ENST00000615216 IGHV3OR16-12A0A075B7B8 117 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 F8VVB4 439 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 F8VWA3 439 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 IGFBP2P18065 325 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 ATP5L2Q7Z4Y8 100 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 EPOPA6NHQ4 379 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.84□□□□□ -1.79
CHD9-221ENST00000615216 CSRP2Q16527 193 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 LY6EQ16553 131 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 ZNF525Q8N782 197 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 MRPL20Q9BYC9 149 aaKnown RBP3.84□□□□□ -1.79
CHD9-221ENST00000615216 FOXA2Q9Y261 457 aaPredicted RBP3.84□□□□□ -1.79
CHD9-221ENST00000615216 PPBPP02775 128 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 OTX1P32242 354 aaPredicted RBP3.84□□□□□ -1.79
CHD9-221ENST00000615216 RNASE4P34096 147 aaKnown RBP3.84□□□□□ -1.79
CHD9-221ENST00000615216 FAM166AQ6J272 317 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 DUX3Q96PT4 197 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 CEP290O15078 2479 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 C17orf98A8MV24 154 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 J3QRE1 110 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 NBR2O15453 112 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 TMEM170AQ8WVE7 144 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 GNB1LQ9BYB4 327 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 KLK15Q9H2R5 256 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 CLDN16Q9Y5I7 305 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 CHD3Q12873 2000 aaKnown RBP3.84□□□□□ -1.79
CHD9-221ENST00000615216 IGLV3-12A0A075B6K2 115 aa3.84□□□□□ -1.79
CHD9-221ENST00000615216 SAA2-SAA4A0A096LPE2 208 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms