RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PVALBP20472 110 aaPredicted RBP11.52□□□□□ -0.57
CD48-203ENST00000613788 HTR2BP41595 481 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 ATP5IP56385 69 aaPredicted RBP11.52□□□□□ -0.57
CD48-203ENST00000613788 S100A10P60903 97 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 RAP2BP61225 183 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 RAB32Q13637 225 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 ZNF329Q86UD4 541 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 NOXA1Q86UR1 476 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 KLHDC1Q8N7A1 406 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 PPP1R1CQ8WVI7 109 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 ZNF355PQ9NSJ1 428 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 A0A1B0GVG6 124 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 H3BUA1 57 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 L7N2F9 121 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 HAX1O00165 279 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 BRI3O95415 125 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 IGLV1-40P01703 118 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 PET100P0DJ07 73 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 IAPPP10997 89 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 BCAP31P51572 246 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 PROK1P58294 105 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 TAS2R30P59541 319 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 VAMP2P63027 116 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 LRRC37A5PQ49AS3 106 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 TMEM65Q6PI78 240 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 ZNF114Q8NC26 417 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 OR5AU1Q8NGC0 362 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 OR1P1Q8NH06 330 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 CHAC2Q8WUX2 184 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 SMIM8Q96KF7 97 aa11.51□□□□□ -0.57
CD48-203ENST00000613788 SETD2Q9BYW2 2564 aaPredicted RBP11.51□□□□□ -0.57
CD48-203ENST00000613788 F11RQ9Y624 299 aaKnown RBP11.51□□□□□ -0.57
CD48-203ENST00000613788 SOX15O60248 233 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 IFNA10P01566 189 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 ELANEP08246 267 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 HIST1H1BP16401 226 aaKnown RBP11.5□□□□□ -0.57
CD48-203ENST00000613788 RPL23AP62750 156 aaKnown RBP11.5□□□□□ -0.57
CD48-203ENST00000613788 CD83Q01151 205 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 FGL1Q08830 312 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 FOXE3Q13461 319 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 SLC25A24Q6NUK1 477 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 SLC24A4Q8NFF2 622 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 WDR89Q96FK6 387 aaPredicted RBP11.5□□□□□ -0.57
CD48-203ENST00000613788 P2RX4Q99571 388 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 C19orf24Q9BVV8 132 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 SLA2Q9H6Q3 261 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 PSENENQ9NZ42 101 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 THYN1Q9P016 225 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 RCL1Q9Y2P8 373 aaKnown RBP11.5□□□□□ -0.57
CD48-203ENST00000613788 TET2Q6N021 2002 aaPredicted RBP11.5□□□□□ -0.57
CD48-203ENST00000613788 C2CD3Q4AC94 2353 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 MPC2O95563 127 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 RNASE2P10153 161 aaKnown RBP11.5□□□□□ -0.57
CD48-203ENST00000613788 PF4V1P10720 104 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 RIPPLY3P57055 190 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 BSXQ3C1V8 233 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 C2orf83Q53S99 150 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
CD48-203ENST00000613788 DEDDO75618 318 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 NPY1RP25929 384 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 PSMB8P28062 276 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 RAB9AP51151 201 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 RAB11AP62491 216 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 KLK9Q2XQG4 91 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 AWAT1Q58HT5 328 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 C10orf99Q6UWK7 81 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 THAP6Q8TBB0 222 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 WIPF2Q8TF74 440 aaPredicted RBP11.49□□□□□ -0.57
CD48-203ENST00000613788 MS4A10Q96PG2 267 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 KLK9Q9UKQ9 250 aa11.49□□□□□ -0.57
CD48-203ENST00000613788 STRAPQ9Y3F4 350 aaKnown RBP11.49□□□□□ -0.57
CD48-203ENST00000613788 TRBV9A0A0B4J1U6 114 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 E5RGE8 158 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 CORTO00230 105 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 TSC22D2O75157 780 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 CCNKO75909 580 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 PRH1P02810 166 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 TRGV3P03979 118 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 PAX9P55771 341 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 PRSS54Q6PEW0 395 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 RNF152Q8N8N0 203 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 NECAP1Q8NC96 275 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 OR2T35Q8NGX2 323 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
CD48-203ENST00000613788 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 A0A0G2JLM5 398 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 TMEM50AO95807 157 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 IFNA4P05014 189 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 TPPP2P59282 170 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 C11orf87Q6NUJ2 197 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 USMG5Q96IX5 58 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 RNF126Q9BV68 326 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 C11orf1Q9H5F2 150 aa11.47□□□□□ -0.57
CD48-203ENST00000613788 PAIP2BQ9ULR5 123 aaKnown RBP11.47□□□□□ -0.57
CD48-203ENST00000613788 H0YIZ8 118 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms