RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 FTH1P19P0C7X4 201 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 GFRA1P56159 465 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 HGFACQ04756 655 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 MEF2CQ06413 473 aaPredicted RBP9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 EFNB3Q15768 340 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 FAM90A2PQ658T7 463 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 ZNF71Q9NQZ8 489 aaPredicted RBP9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 SAA2-SAA4A0A096LPE2 208 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 E9PLN8 166 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 MOSP00540 346 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 SAA2P0DJI9 122 aaPredicted RBP9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 LINC01551Q86U37 167 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 RPP21Q9H633 154 aaKnown RBP9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 TIMP3P35625 211 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 MFAP4P55083 255 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 TREML4Q6UXN2 200 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 SCGB1D4Q6XE38 83 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 GOLT1AQ6ZVE7 132 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 BEND2Q8NDZ0 799 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 MAP1BP46821 2468 aaKnown RBP9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 TNFSF10P50591 281 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 PRR7Q8TB68 274 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 MAP1LC3AQ9H492 121 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 PRDM13Q9H4Q3 707 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 ABCA7Q8IZY2 2146 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 FABP2P12104 132 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 SPANXN1Q5VSR9 72 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 ZNF524Q96C55 264 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 SGK494Q96LW2 274 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 LINC00312Q9Y6C7 94 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 B3GALT5-AS1P59052 145 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 NEU1Q99519 415 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 AP5S1Q9NUS5 200 aa9.11□□□□□ -0.95
CDC42EP3-206ENST00000611976 RP1P56715 2156 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 A0A1B0GW15 77 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 C9JCJ5 164 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 ATXN7O15265 892 aaPredicted RBP9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 FCGR2BP31994 310 aaPredicted RBP9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 GCSAMLQ5JQS6 135 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 CLEC7AQ9BXN2 247 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 RNASE7Q9H1E1 156 aaKnown RBP9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 CLEC5AQ9NY25 188 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 OR4C46A6NHA9 309 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 CIDEAO60543 219 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 SP9P0CG40 484 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 RPL7P18124 248 aaKnown RBP9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 PRCDQ00LT1 54 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 CYB5R2Q6BCY4 276 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 GUCD1Q96NT3 240 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 GGTLC1Q9BX51 225 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 PGPEP1LA6NFU8 196 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 ZNF324O75467 553 aaPredicted RBP9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 UQCRFS1P47985 274 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 LAMTOR2Q9Y2Q5 125 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 ZNF106Q9H2Y7 1883 aaKnown RBP9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 FOXA3P55318 350 aaPredicted RBP9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 C1orf194Q5T5A4 169 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 TCF24Q7RTU0 167 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 FDCSPQ8NFU4 85 aa9.1□□□□□ -0.95
CDC42EP3-206ENST00000611976 TNFSF13O75888 250 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 SAA1P0DJI8 122 aaPredicted RBP9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 FAM216BQ8N7L0 139 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 ELOVL5Q9NYP7 299 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 FAM186AA6NE01 2351 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 IGHV3-48P01763 117 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 RPL13AP40429 203 aaKnown RBP9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 FOXG1P55316 489 aaPredicted RBP9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 Q6P435 159 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 C14orf144Q96I85 54 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 GPR82Q96P67 336 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 MRPL20Q9BYC9 149 aaKnown RBP9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 COL4A4P53420 1690 aaPredicted RBP9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 A0A0G2JRQ6 117 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 WIPF3A6NGB9 483 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 H3BTX0 84 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 PCP4P48539 62 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 ECSCRQ19T08 205 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 Q6AWC8 147 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 FAM19A2Q8N3H0 131 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 HEATR5AQ86XA9 2040 aa9.09□□□□□ -0.95
CDC42EP3-206ENST00000611976 ARF6P62330 175 aa9.09□□□□□ -0.96
CDC42EP3-206ENST00000611976 IL15RAQ13261 267 aa9.09□□□□□ -0.96
CDC42EP3-206ENST00000611976 SAPCD1Q5SSQ6 148 aa9.09□□□□□ -0.96
CDC42EP3-206ENST00000611976 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.96
CDC42EP3-206ENST00000611976 RBPMS2Q6ZRY4 209 aaKnown RBP9.09□□□□□ -0.96
CDC42EP3-206ENST00000611976 RNF166Q96A37 237 aaPredicted RBP9.09□□□□□ -0.96
CDC42EP3-206ENST00000611976 HILPDAQ9Y5L2 63 aa9.09□□□□□ -0.96
CDC42EP3-206ENST00000611976 PPIAL4CA0A0B4J2A2 164 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 HIGD1CA8MV81 97 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 WISP1O95388 367 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 PPIAL4GP0DN37 164 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 GATA2P23769 480 aaPredicted RBP9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 PEAR1Q5VY43 1037 aaPredicted RBP9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 C2orf88Q9BSF0 95 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 RABAC1Q9UI14 185 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 IGHV2-5P01817 119 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 RAB9AP51151 201 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms