RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 ZNF137PP52743 207 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 Q6ZRM9 215 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 CD177Q8N6Q3 437 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 ALPK3Q96L96 1907 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 TRAV30A0A087WSZ9 112 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 BMI1P35226 326 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 TIMP3P35625 211 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 OR4B1Q8NGF8 309 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 SSC4DQ8WTU2 575 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 FAM122AQ96E09 287 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 COQ2Q96H96 371 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 UBTD1Q9HAC8 227 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 ABHD17AQ96GS6 310 aa11.88□□□□□ -0.51
LINC02538-201ENST00000609107 C1QTNF9BB2RNN3 333 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 MLNRO43193 412 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 PRCDQ00LT1 54 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 TMEM170AQ8WVE7 144 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.87□□□□□ -0.51
LINC02538-201ENST00000609107 GRIFINA4D1Z8 144 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 C9JQL5 133 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 SRIP30626 198 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
LINC02538-201ENST00000609107 RNFT1Q5M7Z0 435 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 SPSB3Q6PJ21 355 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 LINC00305Q7Z4B0 112 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 IGKV3-15P01624 115 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 IGHV1-46P01743 117 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 C10orf91Q5T1B1 145 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 Q6ZSR3 168 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 MFAP4P55083 255 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 ZNF585BQ52M93 769 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 TREML4Q6UXN2 200 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 CDC42EP3Q9UKI2 254 aa11.87□□□□□ -0.51
LINC02538-201ENST00000609107 CXCL1P09341 107 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 RPUSD1Q9UJJ7 312 aaKnown RBP11.86□□□□□ -0.51
LINC02538-201ENST00000609107 ZNF407Q9C0G0 2248 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 CBY3A6NI87 242 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 ORM1P02763 201 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 CCL3L1P16619 93 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 ZNF25P17030 456 aaPredicted RBP11.86□□□□□ -0.51
LINC02538-201ENST00000609107 BTF3P20290 206 aaKnown RBP11.86□□□□□ -0.51
LINC02538-201ENST00000609107 TMEM177Q53S58 311 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 FAM169BQ8N8A8 192 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 M0QZ24 198 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 SLC17A3O00476 420 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 MOSP00540 346 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 RPLP1P05386 114 aaKnown RBP11.86□□□□□ -0.51
LINC02538-201ENST00000609107 FAM87AP0C7U9 286 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 PNKDQ8N490 385 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 ARF6P62330 175 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 PMCHL1Q16048 86 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 REC114Q7Z4M0 266 aa11.86□□□□□ -0.51
LINC02538-201ENST00000609107 MBD3L4A6NDZ8 208 aaPredicted RBP11.85□□□□□ -0.51
LINC02538-201ENST00000609107 MBD3L3A6NE82 208 aaPredicted RBP11.85□□□□□ -0.51
LINC02538-201ENST00000609107 MBD3L5A6NJ08 208 aaPredicted RBP11.85□□□□□ -0.51
LINC02538-201ENST00000609107 SMIM17P0DL12 118 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 SELLP14151 372 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 ECSCRQ19T08 205 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 KIAA1644Q3SXP7 199 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 Q8NFD4 153 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 MBD3L2Q8NHZ7 208 aaPredicted RBP11.85□□□□□ -0.51
LINC02538-201ENST00000609107 ZNF257Q9Y2Q1 563 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 STAG3L2P0CL84 134 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 GCSAMLQ5JQS6 135 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 GGTLC1Q9BX51 225 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 CHODLQ9H9P2 273 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
LINC02538-201ENST00000609107 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 C1QTNF9P0C862 333 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 LMO1P25800 156 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 EFNB3Q15768 340 aa11.85□□□□□ -0.51
LINC02538-201ENST00000609107 CD69Q07108 199 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 WFIKKN1Q96NZ8 548 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 AGMATQ9BSE5 352 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 LINC00473A8K010 186 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 PEX7O00628 323 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 GATA2P23769 480 aaPredicted RBP11.84□□□□□ -0.51
LINC02538-201ENST00000609107 LOC105371242A0A075B767 164 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 PPOXP50336 477 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 TMEM189A5PLL7 270 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 FCGR2BP31994 310 aaPredicted RBP11.84□□□□□ -0.51
LINC02538-201ENST00000609107 IMMP2LQ96T52 175 aa11.84□□□□□ -0.51
LINC02538-201ENST00000609107 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
LINC02538-201ENST00000609107 TMSB15BA0A087X1C1 80 aa11.83□□□□□ -0.52
LINC02538-201ENST00000609107 A0A1W2PRE2 83 aa11.83□□□□□ -0.52
LINC02538-201ENST00000609107 TMEM50AO95807 157 aa11.83□□□□□ -0.52
LINC02538-201ENST00000609107 MAS1LP35410 378 aa11.83□□□□□ -0.52
LINC02538-201ENST00000609107 HOXA4Q00056 320 aaPredicted RBP11.83□□□□□ -0.52
LINC02538-201ENST00000609107 LINC01560Q8TB33 94 aa11.83□□□□□ -0.52
LINC02538-201ENST00000609107 ZNF503-AS2A6NEH8 195 aa11.83□□□□□ -0.52
LINC02538-201ENST00000609107 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
LINC02538-201ENST00000609107 KIAA2026Q5HYC2 2103 aa11.83□□□□□ -0.52
LINC02538-201ENST00000609107 ZNF788Q6ZQV5 615 aa11.83□□□□□ -0.52
LINC02538-201ENST00000609107 MUC22E2RYF6 1773 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms