RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 H3BRM9 83 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 TMEM50AO95807 157 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 RNASE7Q9H1E1 156 aaKnown RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 RIPPLY2Q5TAB7 128 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 C11orf68Q9H3H3 251 aaKnown RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 SEMA5BQ9P283 1151 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 RBMY1A1P0DJD3 496 aaKnown RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 RBMY1CP0DJD4 496 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 IGHV3OR16-8A0A075B7F1 116 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 FAM71F2Q6NXP2 309 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 MSGN1A6NI15 193 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 COQ2Q96H96 371 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 BRCA1P38398 1863 aaKnown RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 ADMP35318 185 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 STARD6P59095 220 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 GLMPQ8WWB7 406 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 SBF2Q86WG5 1849 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 GPR183P32249 361 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 NUTF2P61970 127 aaKnown RBP11.06□□□□□ -0.64
USP6NL-205ENST00000609104 LINC01590Q5TEZ4 76 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 ACP7Q6ZNF0 438 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 SPRED2Q7Z698 418 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 HS3ST3B1Q9Y662 390 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 CEP290O15078 2479 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
USP6NL-205ENST00000609104 UCNP55089 124 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 CLEC19AQ6UXS0 136 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 TMEM106BQ9NUM4 274 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 RIPPLY3P57055 190 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 Q9H3A6 140 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 SAMD13Q5VXD3 122 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 LINC01587Q99440 93 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 FHL5Q5TD97 284 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 POLEQ07864 2286 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
USP6NL-205ENST00000609104 RAMP1O60894 148 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 SRP19P09132 144 aaKnown RBP11.06□□□□□ -0.64
USP6NL-205ENST00000609104 C1orf53Q5VUE5 145 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 MIR17HGQ75NE6 70 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 MALP21145 153 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 LINC01560Q8TB33 94 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 IFI27L2Q9H2X8 130 aa11.06□□□□□ -0.64
USP6NL-205ENST00000609104 PRR19A6NJB7 356 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 MEGF9Q9H1U4 602 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 DOCK8Q8NF50 2099 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 IZUMO1RA6ND01 250 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 OR52E5Q8NH55 327 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 FBXL7Q9UJT9 491 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 FOXH1O75593 365 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 GFI1BQ5VTD9 330 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 VCX2Q9H322 139 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 CEP250Q9BV73 2442 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 COX5BP10606 129 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 TMEM30BQ3MIR4 351 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 GATA2P23769 480 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-205ENST00000609104 SMIM10L1P0DMW3 83 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 EIF4EBP2Q13542 120 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-205ENST00000609104 SMIM10Q96HG1 83 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 NACAE9PAV3 2078 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 C17orf98A8MV24 154 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 HTN3P15516 51 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 TEX29Q8N6K0 151 aa11.05□□□□□ -0.64
USP6NL-205ENST00000609104 OR10J3Q5JRS4 329 aa11.04□□□□□ -0.64
USP6NL-205ENST00000609104 PGPEP1LA6NFU8 196 aa11.04□□□□□ -0.64
USP6NL-205ENST00000609104 LOC105371267A0A1B0GV96 52 aa11.04□□□□□ -0.64
USP6NL-205ENST00000609104 H3BUT2 72 aa11.04□□□□□ -0.64
USP6NL-205ENST00000609104 EVI2AP22794 236 aa11.04□□□□□ -0.64
USP6NL-205ENST00000609104 ZNF362Q5T0B9 420 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-205ENST00000609104 RTBDNQ9BSG5 229 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-205ENST00000609104 APOBEC3AP31941 199 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-205ENST00000609104 PRB3Q04118 309 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-205ENST00000609104 FAM201AQ5SY85 155 aa11.04□□□□□ -0.64
USP6NL-205ENST00000609104 TRAV21A0A0B4J279 112 aa11.04□□□□□ -0.64
USP6NL-205ENST00000609104 PAX2Q02962 417 aa11.04□□□□□ -0.64
USP6NL-205ENST00000609104 SLC25A20O43772 301 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 EGR4Q05215 589 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 DOPEY2Q9Y3R5 2298 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 FDCSPQ8NFU4 85 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 CADP27708 2225 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 COL5A3P25940 1745 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-205ENST00000609104 ARPC1AQ92747 370 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 TM2D1Q9BX74 207 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 ATRAIDQ6UW56 229 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
USP6NL-205ENST00000609104 CARHSP1Q9Y2V2 147 aaKnown RBP11.03□□□□□ -0.64
USP6NL-205ENST00000609104 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 B9A039 149 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 PCOLCEQ15113 449 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 LRTM2Q8N967 370 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 LOC390937A0A1W2PQ73 354 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 PPP1R27Q86WC6 154 aa11.03□□□□□ -0.64
USP6NL-205ENST00000609104 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms