RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CROCCP3Q8IVE0 287 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 CMTM1Q8IZ96 169 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 STPG3Q8N7X2 389 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 OR5H2Q8NGV7 314 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 ATP6V0BQ99437 205 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 FXYD6Q9H0Q3 95 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 ANAPC10Q9UM13 185 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 KIR2DL5BA0A0G2JN68 375 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 KIR2DL5BA0A0G2JPC4 375 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 OR4C46A6NHA9 309 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 GPR31O00270 319 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 CTSDP07339 412 aaPredicted RBP9.74□□□□□ -0.85
RPS28-204ENST00000602140 NAT1P18440 290 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 TAS2R46P59540 309 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 TAS2R20P59543 309 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 KIR2DL5AQ8N109 375 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 CADM3Q8N126 398 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 SAMD12Q8N8I0 201 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 OR6F1Q8NGZ6 308 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 KIR2DL5BQ8NHK3 375 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 RNF183Q96D59 192 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 TMEM56Q96MV1 263 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 PRNDQ9UKY0 176 aa9.74□□□□□ -0.85
RPS28-204ENST00000602140 DBX1A6NMT0 343 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 C15orf62A8K5M9 175 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 CTSGP08311 255 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 PRSS3P35030 304 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 RPS19P39019 145 aaKnown RBP9.73□□□□□ -0.85
RPS28-204ENST00000602140 PHLDA2Q53GA4 152 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 CEMP1Q6PRD7 247 aaPredicted RBP9.73□□□□□ -0.85
RPS28-204ENST00000602140 OR5B3Q8NH48 314 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 GALNT14Q96FL9 552 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 TMEM14BQ9NUH8 114 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 FKBP11Q9NYL4 201 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 SMPXQ9UHP9 88 aa9.73□□□□□ -0.85
RPS28-204ENST00000602140 C15orf61A6NNL5 157 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 NUPL2O15504 423 aaKnown RBP9.72□□□□□ -0.85
RPS28-204ENST00000602140 HLA-DMAP28067 261 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 HRH1P35367 487 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 LSM3P62310 102 aaKnown RBP9.72□□□□□ -0.85
RPS28-204ENST00000602140 RELQ04864 619 aaPredicted RBP9.72□□□□□ -0.85
RPS28-204ENST00000602140 KCTD21Q4G0X4 260 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 LYSMD2Q8IV50 215 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 APRG1Q8IVJ8 170 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 OR1P1Q8NH06 330 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 SLC25A46Q96AG3 418 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 ZNF414Q96IQ9 312 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 RNF2Q99496 336 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 TSC22D3Q99576 134 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 RHPN1-AS1Q9BWJ2 59 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 MAP6D1Q9H9H5 199 aa9.72□□□□□ -0.85
RPS28-204ENST00000602140 IGKV3-7A0A075B6H7 116 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 IGHV3-49A0A0A0MS15 119 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 IGHV7-4-1A0A0J9YVY3 117 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 CHEK1O14757 476 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 YIF1AO95070 293 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 ATF4P18848 351 aaPredicted RBP9.71□□□□□ -0.86
RPS28-204ENST00000602140 S100GP29377 79 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 FCGR2BP31994 310 aaPredicted RBP9.71□□□□□ -0.86
RPS28-204ENST00000602140 TFPI2P48307 235 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 TSPAN5P62079 268 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 ZNF124Q15973 351 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 TBC1D26Q86UD7 250 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 TMEM116Q8NCL8 245 aa9.71□□□□□ -0.86
RPS28-204ENST00000602140 KLK5Q9Y337 293 aaPredicted RBP9.71□□□□□ -0.86
RPS28-204ENST00000602140 I3L2K1 104 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 IGHV3-48P01763 117 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 MFAP4P55083 255 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 LPCAT3Q6P1A2 487 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 H2BFWTQ7Z2G1 175 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 TMEM217Q8N7C4 229 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 OR4A16Q8NH70 328 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 GPX8Q8TED1 209 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 SEC22AQ96IW7 307 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 OR10C1Q96KK4 312 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 C6orf62Q9GZU0 229 aaPredicted RBP9.7□□□□□ -0.86
RPS28-204ENST00000602140 CSTL1Q9H114 145 aa9.7□□□□□ -0.86
RPS28-204ENST00000602140 FAM212BQ9NTI7 297 aaPredicted RBP9.7□□□□□ -0.86
RPS28-204ENST00000602140 IGHV3OR16-13A0A075B7E8 117 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 TRAV14DV4A0A0A6YYC5 116 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 IGHV3-74A0A0B4J1X5 117 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 MT-CO2P00403 227 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 IGKV1-39P01597 117 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 IGKV1D-39P04432 117 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 EIF4EP06730 217 aaKnown RBP9.69□□□□□ -0.86
RPS28-204ENST00000602140 CMC4P56277 68 aaPredicted RBP9.69□□□□□ -0.86
RPS28-204ENST00000602140 PINX1Q96BK5 328 aaKnown RBP9.69□□□□□ -0.86
RPS28-204ENST00000602140 YIPF6Q96EC8 236 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 TXN2Q99757 166 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 NXF2Q9GZY0 626 aaKnown RBP9.69□□□□□ -0.86
RPS28-204ENST00000602140 COMMD3Q9UBI1 195 aa9.69□□□□□ -0.86
RPS28-204ENST00000602140 SMIM31A0A1B0GVY4 71 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 MPTX1A8MV57 137 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 GNG7O60262 68 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 HSPE1P61604 102 aaKnown RBP9.68□□□□□ -0.86
RPS28-204ENST00000602140 PRCDQ00LT1 54 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 FAM90A2PQ658T7 463 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 SNX29P2Q8IUI4 249 aa9.68□□□□□ -0.86
RPS28-204ENST00000602140 GBGT1Q8N5D6 347 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms