RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 LGALS7P47929 136 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 RPS16P62249 146 aaKnown RBP8.02□□□□□ -1.13
UPF1-213ENST00000601981 HBG1P69891 147 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 HBG2P69892 147 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 TMEM267Q0VDI3 215 aaPredicted RBP8.02□□□□□ -1.13
UPF1-213ENST00000601981 PLGLAQ15195 96 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 KRTAP24-1Q3LI83 254 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 FAM74A1Q5RGS3 127 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 VKORC1L1Q8N0U8 176 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 PUSL1Q8N0Z8 303 aaKnown RBP8.02□□□□□ -1.13
UPF1-213ENST00000601981 OR4A5Q8NH83 315 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 RNF141Q8WVD5 230 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 TMED6Q8WW62 240 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 HARBI1Q96MB7 349 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 CLCC1Q96S66 551 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 TSNAXQ99598 290 aaKnown RBP8.02□□□□□ -1.13
UPF1-213ENST00000601981 ATP5SQ99766 215 aa8.02□□□□□ -1.13
UPF1-213ENST00000601981 STRAPQ9Y3F4 350 aaKnown RBP8.02□□□□□ -1.13
UPF1-213ENST00000601981 TRAV3A0A0B4J244 114 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 TSPAN9O75954 239 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 IFNA17P01571 189 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 FGF2P09038 288 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 SAA1P0DJI8 122 aaPredicted RBP8.01□□□□□ -1.13
UPF1-213ENST00000601981 SULT1A2P50226 295 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 HSPE1P61604 102 aaKnown RBP8.01□□□□□ -1.13
UPF1-213ENST00000601981 RPP30P78346 268 aaKnown RBP8.01□□□□□ -1.13
UPF1-213ENST00000601981 CLINT1Q14677 625 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 SPANXN5Q5MJ07 72 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 COMMD7Q86VX2 200 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 Q8N6K4 173 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 TMEM217Q8N7C4 229 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 VSTM2AQ8TAG5 236 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 PCNPQ8WW12 178 aaKnown RBP8.01□□□□□ -1.13
UPF1-213ENST00000601981 OR4C12Q96R67 309 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 FKBP11Q9NYL4 201 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 ZNF257Q9Y2Q1 563 aa8.01□□□□□ -1.13
UPF1-213ENST00000601981 TMEM89A2RUT3 159 aa8□□□□□ -1.13
UPF1-213ENST00000601981 SRRM4A7MD48 611 aaKnown RBP8□□□□□ -1.13
UPF1-213ENST00000601981 KBTBD11O94819 623 aa8□□□□□ -1.13
UPF1-213ENST00000601981 IFNA5P01569 189 aa8□□□□□ -1.13
UPF1-213ENST00000601981 METTL15P1P0C7V9 234 aa8□□□□□ -1.13
UPF1-213ENST00000601981 SPP1P10451 314 aa8□□□□□ -1.13
UPF1-213ENST00000601981 VDAC2P45880 294 aaPredicted RBP8□□□□□ -1.13
UPF1-213ENST00000601981 ATP6V1FQ16864 119 aa8□□□□□ -1.13
UPF1-213ENST00000601981 VMA21Q3ZAQ7 101 aa8□□□□□ -1.13
UPF1-213ENST00000601981 C9orf152Q5JTZ5 239 aa8□□□□□ -1.13
UPF1-213ENST00000601981 C12orf54Q6X4T0 127 aa8□□□□□ -1.13
UPF1-213ENST00000601981 Q6ZSV7 163 aa8□□□□□ -1.13
UPF1-213ENST00000601981 HAPLN4Q86UW8 402 aa8□□□□□ -1.13
UPF1-213ENST00000601981 C5orf56Q8N8D9 126 aa8□□□□□ -1.13
UPF1-213ENST00000601981 NPBQ8NG41 125 aa8□□□□□ -1.13
UPF1-213ENST00000601981 TMEM167AQ8TBQ9 72 aa8□□□□□ -1.13
UPF1-213ENST00000601981 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
UPF1-213ENST00000601981 CXorf58Q96LI9 332 aa8□□□□□ -1.13
UPF1-213ENST00000601981 PARD6GQ9BYG4 376 aaPredicted RBP8□□□□□ -1.13
UPF1-213ENST00000601981 C16orf95Q9H693 158 aa8□□□□□ -1.13
UPF1-213ENST00000601981 PFDN2Q9UHV9 154 aa8□□□□□ -1.13
UPF1-213ENST00000601981 OR51B2Q9Y5P1 312 aa8□□□□□ -1.13
UPF1-213ENST00000601981 CLPSL1A2RUU4 121 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 C15orf62A8K5M9 175 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 PMS2P5A8MQ11 134 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 RRHO14718 337 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 NDUFA3O95167 84 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 IGLV2-23P01705 113 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 OR8U8P0C7N1 319 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 HOXA1P49639 335 aaPredicted RBP7.99□□□□□ -1.13
UPF1-213ENST00000601981 RAB5CP51148 216 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 PRCDQ00LT1 54 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 SLC38A11Q08AI6 406 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 ARL16Q0P5N6 197 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 C5orf64Q2M2E5 130 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 SPINK9Q5DT21 86 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 LILRB2Q8N423 598 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 Q8N9W7 124 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 HSD17B11Q8NBQ5 300 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 OR5B3Q8NH48 314 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 PINX1Q96BK5 328 aaKnown RBP7.99□□□□□ -1.13
UPF1-213ENST00000601981 GNPNAT1Q96EK6 184 aaPredicted RBP7.99□□□□□ -1.13
UPF1-213ENST00000601981 HIPK2Q9H2X6 1198 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 ENY2Q9NPA8 101 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 HEYLQ9NQ87 328 aaPredicted RBP7.99□□□□□ -1.13
UPF1-213ENST00000601981 RNF114Q9Y508 228 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 STAB1Q9NY15 2570 aa7.99□□□□□ -1.13
UPF1-213ENST00000601981 FBXO24O75426 580 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 ATP6V0CP27449 155 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 COMPP49747 757 aaPredicted RBP7.98□□□□□ -1.13
UPF1-213ENST00000601981 F2RL1P55085 397 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 ATP5IP56385 69 aaPredicted RBP7.98□□□□□ -1.13
UPF1-213ENST00000601981 RPL8P62917 257 aaKnown RBP7.98□□□□□ -1.13
UPF1-213ENST00000601981 BLOC1S1P78537 153 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 PSG5Q15238 335 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 SLC35E3Q7Z769 313 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 Q8N2B8 174 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 TEX45Q8NA69 505 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 OR10P1Q8NGE3 313 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 LINC01006Q8NI28 216 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 TMEM147Q9BVK8 224 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 ZNF702PQ9H963 129 aa7.98□□□□□ -1.13
UPF1-213ENST00000601981 METTL1Q9UBP6 276 aaKnown RBP7.98□□□□□ -1.13
UPF1-213ENST00000601981 PLXNB1O43157 2135 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms