RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CSMD1Q96PZ7 3565 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 IGLC7A0M8Q6 106 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 RNASE2P10153 161 aaKnown RBP14.3□□□□□ -0.12
VRK3-225ENST00000601912 RAB14P61106 215 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 CX3CL1P78423 397 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 SSBP2P81877 361 aaPredicted RBP14.3□□□□□ -0.12
VRK3-225ENST00000601912 GINS3Q9BRX5 216 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 UQCC1Q9NVA1 299 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 MOB4Q9Y3A3 225 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 HLA-DRB1P01911 266 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 TUSC1Q2TAM9 212 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 DEFB112Q30KQ8 113 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 BCL6BQ8N143 479 aaPredicted RBP14.3□□□□□ -0.12
VRK3-225ENST00000601912 HSD17B11Q8NBQ5 300 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 ABHD5Q8WTS1 349 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 TMED6Q8WW62 240 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 SSMEM1Q8WWF3 244 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 ARPC1AQ92747 370 aa14.3□□□□□ -0.12
VRK3-225ENST00000601912 ZANQ9Y493 2812 aa14.29□□□□□ -0.12
VRK3-225ENST00000601912 TEX22C9J3V5 150 aa14.29□□□□□ -0.12
VRK3-225ENST00000601912 FGF16O43320 207 aa14.29□□□□□ -0.12
VRK3-225ENST00000601912 CD5LO43866 347 aa14.29□□□□□ -0.12
VRK3-225ENST00000601912 DLK1P80370 383 aa14.29□□□□□ -0.12
VRK3-225ENST00000601912 TMEM219Q86XT9 240 aa14.29□□□□□ -0.12
VRK3-225ENST00000601912 C22orf15Q8WYQ4 148 aa14.29□□□□□ -0.12
VRK3-225ENST00000601912 GNPNAT1Q96EK6 184 aaPredicted RBP14.29□□□□□ -0.12
VRK3-225ENST00000601912 FBXO24O75426 580 aa14.28□□□□□ -0.12
VRK3-225ENST00000601912 AREGP15514 252 aa14.28□□□□□ -0.12
VRK3-225ENST00000601912 C5orf56Q8N8D9 126 aa14.28□□□□□ -0.12
VRK3-225ENST00000601912 ZNF114Q8NC26 417 aa14.28□□□□□ -0.12
VRK3-225ENST00000601912 P2RX4Q99571 388 aa14.28□□□□□ -0.12
VRK3-225ENST00000601912 PARD6GQ9BYG4 376 aaPredicted RBP14.28□□□□□ -0.12
VRK3-225ENST00000601912 UBE2L5PA0A1B0GUS4 154 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 MDFIC2A0A1B0GVS7 189 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 A6NDX4 124 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 PRSS46E5RG02 174 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 REG1AP05451 166 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 SEC11BP0C7V7 166 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 APELAP0DMC3 54 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 LY6EQ16553 131 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 VWC2Q2TAL6 325 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 C16orf82Q7Z2V1 217 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 RNASEH2CQ8TDP1 164 aaKnown RBP14.27□□□□□ -0.12
VRK3-225ENST00000601912 SVEP1Q4LDE5 3571 aa14.27□□□□□ -0.12
VRK3-225ENST00000601912 IGHV7-81A0A0B4J1V7 117 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 BTBD17A6NE02 478 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 M0QZK8 103 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 SPP1P10451 314 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 ATP6V0CP27449 155 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 SPNS3Q6ZMD2 512 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 OR1P1Q8NH06 330 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 WDR61Q9GZS3 305 aaKnown RBP14.26□□□□□ -0.13
VRK3-225ENST00000601912 SLC25A32Q9H2D1 315 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 FLNAP21333 2647 aaKnown RBP14.26□□□□□ -0.13
VRK3-225ENST00000601912 CELSR1Q9NYQ6 3014 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 SMCO3A2RU48 225 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 FAM74A1Q5RGS3 127 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 OR5R1Q8NH85 324 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 LRRC20Q8TCA0 184 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 RNF141Q8WVD5 230 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 FAM103A1Q9BTL3 118 aaKnown RBP14.26□□□□□ -0.13
VRK3-225ENST00000601912 TEX15Q9BXT5 2789 aa14.26□□□□□ -0.13
VRK3-225ENST00000601912 NOTCH2Q04721 2471 aa14.25□□□□□ -0.13
VRK3-225ENST00000601912 FNDC10F2Z333 226 aa14.25□□□□□ -0.13
VRK3-225ENST00000601912 CORTO00230 105 aa14.25□□□□□ -0.13
VRK3-225ENST00000601912 IER3P46695 156 aa14.25□□□□□ -0.13
VRK3-225ENST00000601912 OR1L6Q8NGR2 347 aa14.25□□□□□ -0.13
VRK3-225ENST00000601912 CACNG8Q8WXS5 425 aa14.25□□□□□ -0.13
VRK3-225ENST00000601912 TAF15Q92804 592 aaKnown RBP eCLIP14.25□□□□□ -0.13
VRK3-225ENST00000601912 NPVFQ9HCQ7 196 aa14.25□□□□□ -0.13
VRK3-225ENST00000601912 YAE1D1Q9NRH1 226 aa14.25□□□□□ -0.13
VRK3-225ENST00000601912 F11RQ9Y624 299 aaKnown RBP14.25□□□□□ -0.13
VRK3-225ENST00000601912 DEFA4P12838 97 aa14.24□□□□□ -0.13
VRK3-225ENST00000601912 FGF7P21781 194 aa14.24□□□□□ -0.13
VRK3-225ENST00000601912 GPX4P36969 197 aaPredicted RBP14.24□□□□□ -0.13
VRK3-225ENST00000601912 SRP14P37108 136 aaKnown RBP14.24□□□□□ -0.13
VRK3-225ENST00000601912 KRTAP1-1Q07627 177 aa14.24□□□□□ -0.13
VRK3-225ENST00000601912 CLLU1Q5K131 121 aa14.24□□□□□ -0.13
VRK3-225ENST00000601912 OR2G3Q8NGZ4 309 aa14.24□□□□□ -0.13
VRK3-225ENST00000601912 SH3BGRL3Q9H299 93 aa14.24□□□□□ -0.13
VRK3-225ENST00000601912 MPDU1O75352 247 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 TSPAN9O75954 239 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 IGHV4-59P01825 116 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 OPRK1P41145 380 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 NDPQ00604 133 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 RUNX1Q01196 453 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 CD69Q07108 199 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 ETFRF1Q6IPR1 90 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 Q6YL49 198 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 HSPB9Q9BQS6 159 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 WDR83OSQ9Y284 106 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 NAV3Q8IVL0 2385 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 NPIPB5A8MRT5 1133 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 CYB5BO43169 146 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 CTRB1P17538 263 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 HNF1AP20823 631 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 AKR1C1Q04828 323 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 NDUFA5Q16718 116 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 ARSJQ5FYB0 599 aaPredicted RBP14.23□□□□□ -0.13
VRK3-225ENST00000601912 PVRIGQ6DKI7 326 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms