RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TMEM128Q5BJH2 165 aa15.41■□□□□ 0.06
SSBP4-210ENST00000601444 HSD17B13Q7Z5P4 300 aaPredicted RBP15.41■□□□□ 0.06
SSBP4-210ENST00000601444 SLC35G3Q8N808 338 aa15.41■□□□□ 0.06
SSBP4-210ENST00000601444 MCRIP2Q9BUT9 160 aaKnown RBP15.41■□□□□ 0.06
SSBP4-210ENST00000601444 MFSD2BA6NFX1 497 aa15.4■□□□□ 0.06
SSBP4-210ENST00000601444 SEC14L6B5MCN3 397 aa15.4■□□□□ 0.06
SSBP4-210ENST00000601444 OVOL1O14753 267 aa15.4■□□□□ 0.06
SSBP4-210ENST00000601444 NDUFB6O95139 128 aa15.4■□□□□ 0.06
SSBP4-210ENST00000601444 HIST1H1BP16401 226 aaKnown RBP15.4■□□□□ 0.06
SSBP4-210ENST00000601444 SLC25A24Q6NUK1 477 aa15.4■□□□□ 0.06
SSBP4-210ENST00000601444 LYZL2Q7Z4W2 148 aa15.4■□□□□ 0.06
SSBP4-210ENST00000601444 F11RQ9Y624 299 aaKnown RBP15.4■□□□□ 0.06
SSBP4-210ENST00000601444 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.39■□□□□ 0.05
SSBP4-210ENST00000601444 CENPXA8MT69 81 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 PPP5D1E7EU14 171 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 BMPR1BO00238 502 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 IFNA17P01571 189 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 PPP1R1AQ13522 171 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 ANKRD55Q3KP44 614 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 CENPSQ8N2Z9 138 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 S100ZQ8WXG8 99 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 IL22RA2Q969J5 263 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 CCDC140Q96MF4 163 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 CACNG5Q9UF02 275 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 DNAH3Q8TD57 4116 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 NOTCH3Q9UM47 2321 aa15.39■□□□□ 0.05
SSBP4-210ENST00000601444 IGHV3-21A0A0B4J1V1 117 aa15.38■□□□□ 0.05
SSBP4-210ENST00000601444 HLA-AP01891 365 aaKnown RBP15.38■□□□□ 0.05
SSBP4-210ENST00000601444 VAMP1P23763 118 aa15.38■□□□□ 0.05
SSBP4-210ENST00000601444 KLF5Q13887 457 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-210ENST00000601444 CLEC19AQ6UXS0 136 aa15.38■□□□□ 0.05
SSBP4-210ENST00000601444 FAM219AQ8IW50 185 aa15.38■□□□□ 0.05
SSBP4-210ENST00000601444 OR2C3Q8N628 320 aa15.38■□□□□ 0.05
SSBP4-210ENST00000601444 C7orf50Q9BRJ6 194 aaKnown RBP15.38■□□□□ 0.05
SSBP4-210ENST00000601444 CCDC32Q9BV29 185 aa15.38■□□□□ 0.05
SSBP4-210ENST00000601444 PLEKHA3Q9HB20 300 aa15.38■□□□□ 0.05
SSBP4-210ENST00000601444 LYRM1O43325 122 aa15.37■□□□□ 0.05
SSBP4-210ENST00000601444 ANXA3P12429 323 aa15.37■□□□□ 0.05
SSBP4-210ENST00000601444 ZP3P21754 424 aa15.37■□□□□ 0.05
SSBP4-210ENST00000601444 C9orf66Q5T8R8 295 aa15.37■□□□□ 0.05
SSBP4-210ENST00000601444 LGI3Q8N145 548 aa15.37■□□□□ 0.05
SSBP4-210ENST00000601444 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.37■□□□□ 0.05
SSBP4-210ENST00000601444 A0A0B4J2A0 478 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 NXPH3O95157 252 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 SFT2D2O95562 160 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 SYNJ2BPP57105 145 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 EGFEM1PQ0D2K5 195 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 AARDQ4LEZ3 155 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 NMSQ5H8A3 153 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 EEF1AKMT3Q96AZ1 226 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 PDCD10Q9BUL8 212 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 ZC4H2Q9NQZ6 224 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 SHPKQ9UHJ6 478 aa15.36■□□□□ 0.05
SSBP4-210ENST00000601444 WIPF1O43516 503 aa15.35■□□□□ 0.05
SSBP4-210ENST00000601444 ANXA7P20073 488 aaKnown RBP15.35■□□□□ 0.05
SSBP4-210ENST00000601444 ERHP84090 104 aaKnown RBP15.35■□□□□ 0.05
SSBP4-210ENST00000601444 RPEL1Q2QD12 228 aa15.35■□□□□ 0.05
SSBP4-210ENST00000601444 ACSM6Q6P461 480 aa15.35■□□□□ 0.05
SSBP4-210ENST00000601444 OR1P1Q8NH06 330 aa15.35■□□□□ 0.05
SSBP4-210ENST00000601444 CXorf58Q96LI9 332 aa15.35■□□□□ 0.05
SSBP4-210ENST00000601444 GPR61Q9BZJ8 451 aa15.35■□□□□ 0.05
SSBP4-210ENST00000601444 AURKAIP1Q9NWT8 199 aaPredicted RBP15.35■□□□□ 0.05
SSBP4-210ENST00000601444 THYN1Q9P016 225 aa15.35■□□□□ 0.05
SSBP4-210ENST00000601444 K7EIM0 57 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 SAP30O75446 220 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 OR2C1O95371 312 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 CLEC3BP05452 202 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 SRPXP78539 464 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 ZNF846Q147U1 533 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 C11orf87Q6NUJ2 197 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 ZNF114Q8NC26 417 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 ZNF502Q8TBZ5 544 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 TBC1D24Q9ULP9 559 aa15.34■□□□□ 0.05
SSBP4-210ENST00000601444 TRBV7-1A0A0A6YYK4 115 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 C9orf170A2RU37 121 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 CYB5BO43169 146 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 SULT1A3P0DMM9 295 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 SULT1A4P0DMN0 295 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 ARL3P36405 182 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 HOXA1P49639 335 aaPredicted RBP15.33■□□□□ 0.04
SSBP4-210ENST00000601444 SPCS3P61009 180 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 IL34Q6ZMJ4 242 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 OR52E5Q8NH55 327 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 VN1R17PQ8TDU5 208 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 SCARB1Q8WTV0 552 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 MISP3Q96FF7 219 aa15.33■□□□□ 0.04
SSBP4-210ENST00000601444 WDR12Q9GZL7 423 aaKnown RBP15.33■□□□□ 0.04
SSBP4-210ENST00000601444 INS-IGF2F8WCM5 200 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 GGCTO75223 188 aaKnown RBP15.32■□□□□ 0.04
SSBP4-210ENST00000601444 IGHV3-48P01763 117 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 OR4E1P0C645 316 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 GPR183P32249 361 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 IFITM3Q01628 133 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 HAPLN4Q86UW8 402 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 LRTM2Q8N967 370 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 OR9G4Q8NGQ1 327 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 OR1L6Q8NGR2 347 aa15.32■□□□□ 0.04
SSBP4-210ENST00000601444 F8W735 103 aaPredicted RBP15.31■□□□□ 0.04
SSBP4-210ENST00000601444 I3L2K1 104 aa15.31■□□□□ 0.04
SSBP4-210ENST00000601444 RNASE2P10153 161 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms