RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 RND3P61587 244 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 BTNL8Q6UX41 500 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 SCARB1Q8WTV0 552 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 TMEM190Q8WZ59 177 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 ISOC1Q96CN7 298 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 ABHD1Q96SE0 405 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 HIPK2Q9H2X6 1198 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 MRPL27Q9P0M9 148 aaKnown RBP16.99■□□□□ 0.31
SSBP4-209ENST00000601357 UFC1Q9Y3C8 167 aa16.99■□□□□ 0.31
SSBP4-209ENST00000601357 DYNC2H1Q8NCM8 4307 aaKnown RBP16.99■□□□□ 0.31
SSBP4-209ENST00000601357 CD3DP04234 171 aa16.98■□□□□ 0.31
SSBP4-209ENST00000601357 TBPP20226 339 aa16.98■□□□□ 0.31
SSBP4-209ENST00000601357 ALDH3B2P48448 385 aa16.98■□□□□ 0.31
SSBP4-209ENST00000601357 RNASE12Q5GAN4 147 aaKnown RBP16.98■□□□□ 0.31
SSBP4-209ENST00000601357 RNASE10Q5GAN6 216 aaKnown RBP16.98■□□□□ 0.31
SSBP4-209ENST00000601357 SPSB3Q6PJ21 355 aa16.98■□□□□ 0.31
SSBP4-209ENST00000601357 ARRDC1Q8N5I2 433 aa16.98■□□□□ 0.31
SSBP4-209ENST00000601357 OR1L6Q8NGR2 347 aa16.98■□□□□ 0.31
SSBP4-209ENST00000601357 ZNF486Q96H40 463 aaPredicted RBP16.98■□□□□ 0.31
SSBP4-209ENST00000601357 MRPS26Q9BYN8 205 aaKnown RBP16.98■□□□□ 0.31
SSBP4-209ENST00000601357 SRD5A3Q9H8P0 318 aa16.98■□□□□ 0.31
SSBP4-209ENST00000601357 C21orf62Q9NYP8 219 aa16.98■□□□□ 0.31
SSBP4-209ENST00000601357 SLC16A13Q7RTY0 426 aa16.97■□□□□ 0.31
SSBP4-209ENST00000601357 H2BFWTQ7Z2G1 175 aa16.97■□□□□ 0.31
SSBP4-209ENST00000601357 OR1P1Q8NH06 330 aa16.97■□□□□ 0.31
SSBP4-209ENST00000601357 MRGPRFQ96AM1 343 aa16.97■□□□□ 0.31
SSBP4-209ENST00000601357 CHRDL1Q9BU40 450 aa16.97■□□□□ 0.31
SSBP4-209ENST00000601357 MIXL1Q9H2W2 232 aa16.97■□□□□ 0.31
SSBP4-209ENST00000601357 IGHV3-21A0A0B4J1V1 117 aa16.96■□□□□ 0.31
SSBP4-209ENST00000601357 TRAV25A0A0B4J276 109 aa16.96■□□□□ 0.31
SSBP4-209ENST00000601357 IFNA6P05013 189 aa16.96■□□□□ 0.31
SSBP4-209ENST00000601357 ADMP35318 185 aa16.96■□□□□ 0.31
SSBP4-209ENST00000601357 OR2C3Q8N628 320 aa16.96■□□□□ 0.31
SSBP4-209ENST00000601357 ZNF414Q96IQ9 312 aa16.96■□□□□ 0.31
SSBP4-209ENST00000601357 RETNQ9HD89 108 aa16.96■□□□□ 0.31
SSBP4-209ENST00000601357 NDUFA4O00483 81 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 SCAF4O95104 1147 aaKnown RBP16.95■□□□□ 0.3
SSBP4-209ENST00000601357 CD74P04233 296 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 PI3P19957 117 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 PRCDQ00LT1 54 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 ZNF114Q8NC26 417 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 OR4D10Q8NGI6 311 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 OR52B4Q8NGK2 314 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 OR4A16Q8NH70 328 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 C15orf40Q8WUR7 153 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 C5orf66Q9H5L9 145 aa16.95■□□□□ 0.3
SSBP4-209ENST00000601357 DAZ1Q9NQZ3 744 aaKnown RBP16.95■□□□□ 0.3
SSBP4-209ENST00000601357 P0C879 139 aa16.94■□□□□ 0.3
SSBP4-209ENST00000601357 PIGPP57054 158 aa16.94■□□□□ 0.3
SSBP4-209ENST00000601357 SPCS2Q15005 226 aa16.94■□□□□ 0.3
SSBP4-209ENST00000601357 GPR141Q7Z602 305 aa16.94■□□□□ 0.3
SSBP4-209ENST00000601357 TMEM229BQ8NBD8 167 aa16.94■□□□□ 0.3
SSBP4-209ENST00000601357 TP53RKQ96S44 253 aa16.94■□□□□ 0.3
SSBP4-209ENST00000601357 I3L2K1 104 aa16.93■□□□□ 0.3
SSBP4-209ENST00000601357 IGKV1-5P01602 117 aa16.93■□□□□ 0.3
SSBP4-209ENST00000601357 CTSGP08311 255 aa16.93■□□□□ 0.3
SSBP4-209ENST00000601357 PGAM2P15259 253 aa16.93■□□□□ 0.3
SSBP4-209ENST00000601357 HSPE1P61604 102 aaKnown RBP16.93■□□□□ 0.3
SSBP4-209ENST00000601357 ANKRD55Q3KP44 614 aa16.93■□□□□ 0.3
SSBP4-209ENST00000601357 LYSTQ99698 3801 aa16.92■□□□□ 0.3
SSBP4-209ENST00000601357 SACSQ9NZJ4 4579 aa16.92■□□□□ 0.3
SSBP4-209ENST00000601357 GABARAPH6UMI1 98 aa16.92■□□□□ 0.3
SSBP4-209ENST00000601357 FCGR2BP31994 310 aaPredicted RBP16.92■□□□□ 0.3
SSBP4-209ENST00000601357 TAS2R19P59542 299 aa16.92■□□□□ 0.3
SSBP4-209ENST00000601357 IZUMO4Q1ZYL8 232 aa16.92■□□□□ 0.3
SSBP4-209ENST00000601357 RBPMS2Q6ZRY4 209 aaKnown RBP16.92■□□□□ 0.3
SSBP4-209ENST00000601357 UBAC2Q8NBM4 344 aa16.92■□□□□ 0.3
SSBP4-209ENST00000601357 TERB2Q8NHR7 220 aa16.92■□□□□ 0.3
SSBP4-209ENST00000601357 K7EMT4 169 aa16.91■□□□□ 0.3
SSBP4-209ENST00000601357 CTDSP2O14595 271 aa16.91■□□□□ 0.3
SSBP4-209ENST00000601357 PPP5CP53041 499 aa16.91■□□□□ 0.3
SSBP4-209ENST00000601357 Q56UQ5 140 aa16.91■□□□□ 0.3
SSBP4-209ENST00000601357 ZFAND6Q6FIF0 208 aa16.91■□□□□ 0.3
SSBP4-209ENST00000601357 SPAG8Q99932 426 aaPredicted RBP16.91■□□□□ 0.3
SSBP4-209ENST00000601357 FAM110AQ9BQ89 295 aa16.91■□□□□ 0.3
SSBP4-209ENST00000601357 GAR1Q9NY12 217 aaKnown RBP16.91■□□□□ 0.3
SSBP4-209ENST00000601357 TENM2Q9NT68 2774 aa16.9■□□□□ 0.3
SSBP4-209ENST00000601357 A0A0B4J293 547 aa16.9■□□□□ 0.3
SSBP4-209ENST00000601357 C3orf85A0A1B0GTC6 90 aa16.9■□□□□ 0.3
SSBP4-209ENST00000601357 TSPAN4O14817 238 aa16.9■□□□□ 0.3
SSBP4-209ENST00000601357 MRPS10P82664 201 aaKnown RBP16.9■□□□□ 0.3
SSBP4-209ENST00000601357 SSBP1Q04837 148 aaKnown RBP16.9■□□□□ 0.3
SSBP4-209ENST00000601357 STEAP1BQ6NZ63 245 aa16.9■□□□□ 0.3
SSBP4-209ENST00000601357 OR13C8Q8NGS7 320 aa16.9■□□□□ 0.3
SSBP4-209ENST00000601357 MISP3Q96FF7 219 aa16.9■□□□□ 0.3
SSBP4-209ENST00000601357 TXN2Q99757 166 aa16.9■□□□□ 0.3
SSBP4-209ENST00000601357 C15orf62A8K5M9 175 aa16.89■□□□□ 0.29
SSBP4-209ENST00000601357 INS-IGF2F8WCM5 200 aa16.89■□□□□ 0.29
SSBP4-209ENST00000601357 RGS5O15539 181 aa16.89■□□□□ 0.29
SSBP4-209ENST00000601357 RAB3DO95716 219 aa16.89■□□□□ 0.29
SSBP4-209ENST00000601357 ZFAND1Q8TCF1 268 aa16.89■□□□□ 0.29
SSBP4-209ENST00000601357 IGHV3OR16-8A0A075B7F1 116 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 MT-CO2P00403 227 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 UCP1P25874 307 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 MFAP4P55083 255 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 MARCH1Q8TCQ1 289 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 DYNC2LI1Q8TCX1 351 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 SMIM4Q8WVI0 70 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 OR10C1Q96KK4 312 aa16.88■□□□□ 0.29
SSBP4-209ENST00000601357 C20orf24Q9BUV8 137 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms