RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 MUC4Q99102 2169 aa12.18□□□□□ -0.46
USE1-208ENST00000600970 IGHV3OR16-13A0A075B7E8 117 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 IGHV3-74A0A0B4J1X5 117 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 IGHV4-28A0A0C4DH34 117 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 PRSS29PA6NIE9 313 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 YIF1AO95070 293 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 HLA-DMBP28068 263 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 ARPC4P59998 168 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 PAFAH1B2P68402 229 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 ZNF818PQ6ZRF7 136 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 Q6ZTC4 211 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 PRSS48Q7RTY5 328 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 BEST4Q8NFU0 473 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 LSM10Q969L4 123 aaKnown RBP12.17□□□□□ -0.46
USE1-208ENST00000600970 DGCR14Q96DF8 476 aaKnown RBP12.17□□□□□ -0.46
USE1-208ENST00000600970 HINT2Q9BX68 163 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 VCXQ9H320 206 aa12.17□□□□□ -0.46
USE1-208ENST00000600970 TRAV14DV4A0A0A6YYC5 116 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 TRAV10A0A0B4J240 114 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 TRDV1A0A1B0GX56 115 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 RTL8CO15255 209 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 NUPL2O15504 423 aaKnown RBP12.16□□□□□ -0.46
USE1-208ENST00000600970 FXYD4P59646 89 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 DEFB131AP59861 70 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 LEMD1Q68G75 181 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 PVRIGQ6DKI7 326 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 TCF24Q7RTU0 167 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 COMMD9Q9P000 198 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 NSG2Q9Y328 171 aa12.16□□□□□ -0.46
USE1-208ENST00000600970 SCGNO76038 276 aa12.15□□□□□ -0.46
USE1-208ENST00000600970 ERVK-16P61578 105 aa12.15□□□□□ -0.46
USE1-208ENST00000600970 AADACL3Q5VUY0 350 aa12.15□□□□□ -0.46
USE1-208ENST00000600970 C22orf42Q6IC83 251 aa12.15□□□□□ -0.46
USE1-208ENST00000600970 KRTAP4-5Q9BYR2 181 aa12.15□□□□□ -0.46
USE1-208ENST00000600970 NXF2Q9GZY0 626 aaKnown RBP12.15□□□□□ -0.46
USE1-208ENST00000600970 NDUFB11Q9NX14 153 aa12.15□□□□□ -0.46
USE1-208ENST00000600970 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.46
USE1-208ENST00000600970 MARCH11A6NNE9 402 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 NOTOA8MTQ0 251 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 DFFBO76075 338 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 GIG44P09565 113 aaPredicted RBP12.14□□□□□ -0.47
USE1-208ENST00000600970 MIFP14174 115 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 MFAP4P55083 255 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 TBCEQ15813 527 aaPredicted RBP12.14□□□□□ -0.47
USE1-208ENST00000600970 ZNF367Q7RTV3 350 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 HOGA1Q86XE5 327 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 STHQ8IWL8 128 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 FAM24BQ8N5W8 94 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 RNF126Q9BV68 326 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 MS4A6AQ9H2W1 248 aa12.14□□□□□ -0.47
USE1-208ENST00000600970 ELOA3CA0A087WX78 387 aaPredicted RBP12.13□□□□□ -0.47
USE1-208ENST00000600970 I3L2K1 104 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 M0R2N4 97 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 DNASE2O00115 360 aaPredicted RBP12.13□□□□□ -0.47
USE1-208ENST00000600970 EBAG9O00559 213 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 CD5P06127 495 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 LILRB2Q8N423 598 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 POM121L12Q8N7R1 296 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 OR1P1Q8NH06 330 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 GIMAP1Q8WWP7 306 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 ST8SIA2Q92186 375 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 SLC25A46Q96AG3 418 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 TMEM56Q96MV1 263 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 TXN2Q99757 166 aa12.13□□□□□ -0.47
USE1-208ENST00000600970 ZNF705EA8MWA4 302 aaPredicted RBP12.12□□□□□ -0.47
USE1-208ENST00000600970 ST8SIA3O43173 380 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
USE1-208ENST00000600970 EIF4EP06730 217 aaKnown RBP12.12□□□□□ -0.47
USE1-208ENST00000600970 FCER2P06734 321 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 GNRHRP30968 328 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 AQP4P55087 323 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 LGALS14Q8TCE9 139 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 MISP3Q96FF7 219 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 DAPK2Q9UIK4 370 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 X6R8D5 127 aa12.12□□□□□ -0.47
USE1-208ENST00000600970 TRAV2A0A0B4J234 112 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 DBX1A6NMT0 343 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 SNAPC5O75971 98 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 KRASP01116 189 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 AMBPP02760 352 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 P0DMU3 169 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 FAM231AP0DMU4 169 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 FAM231CP0DMU5 169 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 F2RP25116 425 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 G6PCP35575 357 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 TMEM41BQ5BJD5 291 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 TRPT1Q86TN4 253 aaKnown RBP12.11□□□□□ -0.47
USE1-208ENST00000600970 CADM3Q8N126 398 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 CENPSQ8N2Z9 138 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 FCAMRQ8WWV6 532 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 GINS3Q9BRX5 216 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 RHBDL2Q9NX52 303 aa12.11□□□□□ -0.47
USE1-208ENST00000600970 TRAV18A0A075B6X5 111 aa12.1□□□□□ -0.47
USE1-208ENST00000600970 IGHV3-66A0A0C4DH42 116 aa12.1□□□□□ -0.47
USE1-208ENST00000600970 RLN1P04808 185 aa12.1□□□□□ -0.47
USE1-208ENST00000600970 C4BPBP20851 252 aa12.1□□□□□ -0.47
USE1-208ENST00000600970 LPAR6P43657 344 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms