RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 SFT2D2O95562 160 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 SPCS3P61009 180 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 SUPT4H1P63272 117 aaKnown RBP10.07□□□□□ -0.8
SRRM1-223ENST00000600523 PPP1R1AQ13522 171 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 FHL3Q13643 280 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 RPEL1Q2QD12 228 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 ZNF343Q6P1L6 599 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 OR52E5Q8NH55 327 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 ENKURQ8TC29 256 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 CACNG5Q9UF02 275 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 TMED3Q9Y3Q3 217 aa10.07□□□□□ -0.8
SRRM1-223ENST00000600523 F11RQ9Y624 299 aaKnown RBP10.07□□□□□ -0.8
SRRM1-223ENST00000600523 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 A0A087WW49 117 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 A0A1B0GU03 582 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 A0A1B0GW64 132 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 CGB1A6NKQ9 187 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 PLA2G10O15496 165 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 IFNA21P01568 189 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 OR4E1P0C645 316 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 P0C879 139 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 IGLL1P15814 213 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 WT1-ASQ06250 92 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 SMCO1Q147U7 214 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 IZUMO4Q1ZYL8 232 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 LYZL2Q7Z4W2 148 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 OR2C3Q8N628 320 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 OR1P1Q8NH06 330 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 OR1S1Q8NH92 325 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 LHFPL5Q8TAF8 219 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 GPR146Q96CH1 333 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 ELOVL1Q9BW60 279 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 ALX4Q9H161 411 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-223ENST00000600523 C20orf85Q9H1P6 137 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 HIPK2Q9H2X6 1198 aa10.06□□□□□ -0.8
SRRM1-223ENST00000600523 HEYLQ9NQ87 328 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-223ENST00000600523 GAR1Q9NY12 217 aaKnown RBP10.06□□□□□ -0.8
SRRM1-223ENST00000600523 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.05□□□□□ -0.8
SRRM1-223ENST00000600523 DBX1A6NMT0 343 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 CEBPZOSA8MTT3 80 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 CORTO00230 105 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 OVOL1O14753 267 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 NDUFB8O95169 186 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 TCRBP04435 133 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 ASAH1Q13510 395 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 C9orf66Q5T8R8 295 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 LYG2Q86SG7 212 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 NOXA1Q86UR1 476 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 VN1R17PQ8TDU5 208 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 FANCD2OSQ96PS1 177 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 NUDT15Q9NV35 164 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 PRR13Q9NZ81 148 aa10.05□□□□□ -0.8
SRRM1-223ENST00000600523 WNK1Q9H4A3 2382 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 TRAV6A0A075B6T7 132 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 C9orf170A2RU37 121 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 SCGB2A1O75556 95 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 ANXA7P20073 488 aaKnown RBP10.04□□□□□ -0.8
SRRM1-223ENST00000600523 HOXD3P31249 432 aaPredicted RBP10.04□□□□□ -0.8
SRRM1-223ENST00000600523 BTCP35070 178 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 INSL3P51460 131 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 DEFA5Q01523 94 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 DHRS2Q13268 280 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 KLK9Q2XQG4 91 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 OXLD1Q5BKU9 147 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 NMSQ5H8A3 153 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 ZNF114Q8NC26 417 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 MISP3Q96FF7 219 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 OR4C12Q96R67 309 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 PEMTQ9UBM1 199 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 KLK9Q9UKQ9 250 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 FLVCR2Q9UPI3 526 aa10.04□□□□□ -0.8
SRRM1-223ENST00000600523 A0A0G2JRQ6 117 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 GGCTO75223 188 aaKnown RBP10.03□□□□□ -0.8
SRRM1-223ENST00000600523 MED6O75586 246 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 HOXB5P09067 269 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 H2AFB2P0C5Z0 115 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 SLC25A6P12236 298 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 ARL3P36405 182 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 HTR2BP41595 481 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 SLURP1P55000 103 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 ANKRD55Q3KP44 614 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 AARDQ4LEZ3 155 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 SPINK9Q5DT21 86 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 SAMD5Q5TGI4 173 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 Q6ZRM9 215 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 DCUN1D4Q92564 292 aa10.03□□□□□ -0.8
SRRM1-223ENST00000600523 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.8
SRRM1-223ENST00000600523 FAM90A26D6RGX4 464 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 G3V4G9 280 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 TNFRSF9Q07011 255 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 FAM106AQ4KMX7 169 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 PDLIM3Q53GG5 364 aaPredicted RBP10.02□□□□□ -0.81
SRRM1-223ENST00000600523 Q56UQ5 140 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 PLET1Q6UQ28 207 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 CLEC19AQ6UXS0 136 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms