RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 HIST1H1BP16401 226 aaKnown RBP15□□□□□ -0.01
UPF1-209ENST00000600310 SPCS3P61009 180 aa15□□□□□ -0.01
UPF1-209ENST00000600310 RHOGP84095 191 aa15□□□□□ -0.01
UPF1-209ENST00000600310 RUNX1Q01196 453 aa15□□□□□ -0.01
UPF1-209ENST00000600310 PDLIM3Q53GG5 364 aaPredicted RBP15□□□□□ -0.01
UPF1-209ENST00000600310 PLET1Q6UQ28 207 aa15□□□□□ -0.01
UPF1-209ENST00000600310 FAM223AQ8IWN6 122 aa15□□□□□ -0.01
UPF1-209ENST00000600310 OR2C3Q8N628 320 aa15□□□□□ -0.01
UPF1-209ENST00000600310 IGLV11-55A0A075B6I3 123 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 I3L521 148 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 OR2J3O76001 311 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 HOXB5P09067 269 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 ERHP84090 104 aaKnown RBP14.99□□□□□ -0.01
UPF1-209ENST00000600310 SPINK9Q5DT21 86 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 GGNBP1Q5YKI7 109 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 NECAP1Q8NC96 275 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 ZNF431Q8TF32 576 aaPredicted RBP14.99□□□□□ -0.01
UPF1-209ENST00000600310 SEC22CQ9BRL7 303 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 MARVELD1Q9BSK0 173 aa14.99□□□□□ -0.01
UPF1-209ENST00000600310 C13orf42A0A1B0GVH6 325 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 PITX3O75364 302 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 IGHV3-11P01762 117 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 LGALS1P09382 135 aaKnown RBP14.98□□□□□ -0.01
UPF1-209ENST00000600310 MYCNOSP40205 109 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 DEFA5Q01523 94 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 ETV3LQ6ZN32 361 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 OR5B12Q96R08 314 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 FBXL7Q9UJT9 491 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 DMRT1Q9Y5R6 373 aa14.98□□□□□ -0.01
UPF1-209ENST00000600310 F11RQ9Y624 299 aaKnown RBP14.98□□□□□ -0.01
UPF1-209ENST00000600310 INMT-MINDY4F8WBC2 141 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 CCL24O00175 119 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 CYB5BO43169 146 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 ADAP1O75689 374 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 ATP5G2Q06055 141 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 ZNF114Q8NC26 417 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 OR1L6Q8NGR2 347 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 RAX2Q96IS3 184 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 P2RX4Q99571 388 aa14.97□□□□□ -0.01
UPF1-209ENST00000600310 NDUFB8O95169 186 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 IFNA21P01568 189 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 HOXA1P49639 335 aaPredicted RBP14.96□□□□□ -0.01
UPF1-209ENST00000600310 MFAP2P55001 183 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 DEFB136Q30KP8 78 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 C15orf32Q32M92 178 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 ZNF343Q6P1L6 599 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 OR1P1Q8NH06 330 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 OR1S1Q8NH92 325 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 ENY2Q9NPA8 101 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 THYN1Q9P016 225 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 HSPB7Q9UBY9 170 aa14.96□□□□□ -0.01
UPF1-209ENST00000600310 PRAF2O60831 178 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 PTTG1O95997 202 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 PF4P02776 101 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 SPNP16150 400 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 TNFRSF9Q07011 255 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 DCTN2Q13561 401 aaKnown RBP14.95□□□□□ -0.02
UPF1-209ENST00000600310 SLC25A24Q6NUK1 477 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 TREML4Q6UXN2 200 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 C12orf45Q8N5I9 185 aaPredicted RBP14.95□□□□□ -0.02
UPF1-209ENST00000600310 OR11H1Q8NG94 326 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 OR1N2Q8NGR9 330 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 DUX3Q96PT4 197 aa14.95□□□□□ -0.02
UPF1-209ENST00000600310 GPN1Q9HCN4 374 aaPredicted RBP14.95□□□□□ -0.02
UPF1-209ENST00000600310 CEBPZOSA8MTT3 80 aa14.94□□□□□ -0.02
UPF1-209ENST00000600310 MPTX1A8MV57 137 aa14.94□□□□□ -0.02
UPF1-209ENST00000600310 NXPH3O95157 252 aa14.94□□□□□ -0.02
UPF1-209ENST00000600310 HSPB1P04792 205 aaKnown RBP14.94□□□□□ -0.02
UPF1-209ENST00000600310 FHL3Q13643 280 aa14.94□□□□□ -0.02
UPF1-209ENST00000600310 EXOSC2Q13868 293 aaKnown RBP14.94□□□□□ -0.02
UPF1-209ENST00000600310 SNRPGP15A8MWD9 76 aa14.93□□□□□ -0.02
UPF1-209ENST00000600310 FAM90A26D6RGX4 464 aa14.93□□□□□ -0.02
UPF1-209ENST00000600310 SNCAP37840 140 aa14.93□□□□□ -0.02
UPF1-209ENST00000600310 ZNF616Q08AN1 781 aa14.93□□□□□ -0.02
UPF1-209ENST00000600310 BSXQ3C1V8 233 aa14.93□□□□□ -0.02
UPF1-209ENST00000600310 PVRIGQ6DKI7 326 aa14.93□□□□□ -0.02
UPF1-209ENST00000600310 LINC00482Q8N8I6 264 aa14.93□□□□□ -0.02
UPF1-209ENST00000600310 CXorf58Q96LI9 332 aa14.93□□□□□ -0.02
UPF1-209ENST00000600310 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.92□□□□□ -0.02
UPF1-209ENST00000600310 RNASE2P10153 161 aaKnown RBP14.92□□□□□ -0.02
UPF1-209ENST00000600310 SUB1P53999 127 aaKnown RBP eCLIP14.92□□□□□ -0.02
UPF1-209ENST00000600310 FAM209BQ5JX69 171 aa14.92□□□□□ -0.02
UPF1-209ENST00000600310 UXS1Q8NBZ7 420 aa14.92□□□□□ -0.02
UPF1-209ENST00000600310 WFDC9Q8NEX5 89 aa14.92□□□□□ -0.02
UPF1-209ENST00000600310 VN1R17PQ8TDU5 208 aa14.92□□□□□ -0.02
UPF1-209ENST00000600310 DPF1Q92782 380 aa14.92□□□□□ -0.02
UPF1-209ENST00000600310 EEF1AKMT3Q96AZ1 226 aa14.92□□□□□ -0.02
UPF1-209ENST00000600310 RBKSQ9H477 322 aa14.92□□□□□ -0.02
UPF1-209ENST00000600310 RANGRFQ9HD47 186 aaPredicted RBP14.92□□□□□ -0.02
UPF1-209ENST00000600310 HEYLQ9NQ87 328 aaPredicted RBP14.92□□□□□ -0.02
UPF1-209ENST00000600310 PEF1Q9UBV8 284 aaKnown RBP14.92□□□□□ -0.02
UPF1-209ENST00000600310 WNK1Q9H4A3 2382 aa14.91□□□□□ -0.02
UPF1-209ENST00000600310 IGHV4OR15-8A0A075B7B6 117 aa14.91□□□□□ -0.02
UPF1-209ENST00000600310 A0A087WW49 117 aa14.91□□□□□ -0.02
UPF1-209ENST00000600310 ANKRD34BA5PLL1 514 aa14.91□□□□□ -0.02
UPF1-209ENST00000600310 LINC01619G3V211 115 aa14.91□□□□□ -0.02
UPF1-209ENST00000600310 OR8U8P0C7N1 319 aa14.91□□□□□ -0.02
UPF1-209ENST00000600310 DTD1Q8TEA8 209 aa14.91□□□□□ -0.02
UPF1-209ENST00000600310 OR10C1Q96KK4 312 aa14.91□□□□□ -0.02
UPF1-209ENST00000600310 HIPK2Q9H2X6 1198 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms