RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SLC2A9Q9NRM0 540 aa12.99□□□□□ -0.33
SSBP4-207ENST00000600244 SLC35D1Q9NTN3 355 aa12.99□□□□□ -0.33
SSBP4-207ENST00000600244 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
SSBP4-207ENST00000600244 KIR2DL5BA0A0G2JN68 375 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 KIR2DL5BA0A0G2JPC4 375 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 IGLL5B9A064 214 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 TNFSF12O43508 249 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 IGKV1-16P04430 117 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 RRASP10301 218 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 KCTD9Q7L273 389 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 CMTM1Q8IZ96 169 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 KIR2DL5AQ8N109 375 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 KIR2DL5BQ8NHK3 375 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 ZFAND1Q8TCF1 268 aa12.98□□□□□ -0.33
SSBP4-207ENST00000600244 LINC00854A0A1B0GVQ3 168 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSBP4-207ENST00000600244 LYRM1O43325 122 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 APOA2P02652 100 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 PGAM2P15259 253 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 PI3P19957 117 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 CBLN1P23435 193 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 ASAH1Q13510 395 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 ANKRD55Q3KP44 614 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 PHLDA2Q53GA4 152 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 TMEM177Q53S58 311 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 STPG3Q8N7X2 389 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 TMEM68Q96MH6 324 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 TSC22D3Q99576 134 aa12.97□□□□□ -0.33
SSBP4-207ENST00000600244 SLC25A21Q9BQT8 299 aaPredicted RBP12.97□□□□□ -0.33
SSBP4-207ENST00000600244 CENPXA8MT69 81 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 H7C2Y5 167 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 F2RP25116 425 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 CCR6P51684 374 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 PIGPP57054 158 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 CATR1Q13166 79 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 RTL8BQ17RB0 113 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 TCTEX1D2Q8WW35 142 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 FAM212BQ9NTI7 297 aaPredicted RBP12.96□□□□□ -0.33
SSBP4-207ENST00000600244 PRELID3BQ9Y3B1 194 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 DMRT1Q9Y5R6 373 aa12.96□□□□□ -0.33
SSBP4-207ENST00000600244 MPPED1O15442 326 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 FCGR3BO75015 233 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 NDUFB6O95139 128 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 IGLV2-23P01705 113 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 RLN1P04808 185 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 ZNF585BQ52M93 769 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 TBC1D26Q86UD7 250 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 OR51H1Q8NH63 302 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 CACNG8Q8WXS5 425 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 TMEM230Q96A57 120 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 SCGB3A2Q96PL1 93 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 MLXQ9UH92 298 aa12.95□□□□□ -0.34
SSBP4-207ENST00000600244 SRRM4A7MD48 611 aaKnown RBP12.94□□□□□ -0.34
SSBP4-207ENST00000600244 LGALS9O00182 355 aa12.94□□□□□ -0.34
SSBP4-207ENST00000600244 SCAF4O95104 1147 aaKnown RBP12.94□□□□□ -0.34
SSBP4-207ENST00000600244 SPDEFO95238 335 aa12.94□□□□□ -0.34
SSBP4-207ENST00000600244 CRYZL1O95825 349 aa12.94□□□□□ -0.34
SSBP4-207ENST00000600244 CRYGBP07316 175 aa12.94□□□□□ -0.34
SSBP4-207ENST00000600244 LGALS7P47929 136 aa12.94□□□□□ -0.34
SSBP4-207ENST00000600244 MFAP2P55001 183 aa12.94□□□□□ -0.34
SSBP4-207ENST00000600244 SPAG16Q8N0X2 631 aa12.94□□□□□ -0.34
SSBP4-207ENST00000600244 OR4S2Q8NH73 311 aa12.94□□□□□ -0.34
SSBP4-207ENST00000600244 OSR1Q8TAX0 266 aaPredicted RBP12.94□□□□□ -0.34
SSBP4-207ENST00000600244 C11orf68Q9H3H3 251 aaKnown RBP12.94□□□□□ -0.34
SSBP4-207ENST00000600244 C14orf166Q9Y224 244 aaKnown RBP12.94□□□□□ -0.34
SSBP4-207ENST00000600244 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.93□□□□□ -0.34
SSBP4-207ENST00000600244 CRYM-AS1A6NIL9 109 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 M0R2N4 97 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 S100GP29377 79 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 POU2AF1Q16633 256 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 OR2B11Q5JQS5 317 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 CCDC71LQ8N9Z2 235 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 ADAD2Q8NCV1 583 aaKnown RBP12.93□□□□□ -0.34
SSBP4-207ENST00000600244 CD300LFQ8TDQ1 290 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 PLEKHA2Q9HB19 425 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 COPZ2Q9P299 210 aa12.93□□□□□ -0.34
SSBP4-207ENST00000600244 FCGR2BP31994 310 aaPredicted RBP12.92□□□□□ -0.34
SSBP4-207ENST00000600244 RPS16P62249 146 aaKnown RBP12.92□□□□□ -0.34
SSBP4-207ENST00000600244 DHODHQ02127 395 aa12.92□□□□□ -0.34
SSBP4-207ENST00000600244 PJVKQ0ZLH3 352 aa12.92□□□□□ -0.34
SSBP4-207ENST00000600244 HARBI1Q96MB7 349 aa12.92□□□□□ -0.34
SSBP4-207ENST00000600244 TP53RKQ96S44 253 aa12.92□□□□□ -0.34
SSBP4-207ENST00000600244 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
SSBP4-207ENST00000600244 NAA60Q9H7X0 242 aa12.92□□□□□ -0.34
SSBP4-207ENST00000600244 SCRT2Q9NQ03 307 aa12.92□□□□□ -0.34
SSBP4-207ENST00000600244 C3orf85A0A1B0GTC6 90 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 SHOXO15266 292 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 B3GALNT1O75752 331 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 HPRT1P00492 218 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 IL6RP08887 468 aaPredicted RBP12.91□□□□□ -0.34
SSBP4-207ENST00000600244 UCP1P25874 307 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 UBE2KP61086 200 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 SUPT4H1P63272 117 aaKnown RBP12.91□□□□□ -0.34
SSBP4-207ENST00000600244 CBX3Q13185 183 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 EXOSC2Q13868 293 aaKnown RBP12.91□□□□□ -0.34
SSBP4-207ENST00000600244 MRGPRG-AS1Q2M3A8 158 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 MZT2BQ6NZ67 158 aa12.91□□□□□ -0.34
SSBP4-207ENST00000600244 CADM3Q8N126 398 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms