RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 WIPF1O43516 503 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 NDUFB6O95139 128 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 IGHV3-23P01764 117 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 HIST1H1BP16401 226 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 MECP2P51608 486 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 KRTAP10-11P60412 298 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 TMEM128Q5BJH2 165 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 SPINK9Q5DT21 86 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 FAM219AQ8IW50 185 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 SLC35G3Q8N808 338 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 IL22RA2Q969J5 263 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 GPR146Q96CH1 333 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 C7orf50Q9BRJ6 194 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 F11RQ9Y624 299 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 ZP3P21754 424 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 PPP1R1AQ13522 171 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 AARDQ4LEZ3 155 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 CENPSQ8N2Z9 138 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 OR2C3Q8N628 320 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 CCDC32Q9BV29 185 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 GPR61Q9BZJ8 451 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 CACNG5Q9UF02 275 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 FLVCR2Q9UPI3 526 aa10.41□□□□□ -0.74
SOX2-OT-229ENST00000598474 CENPXA8MT69 81 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 PPP5D1E7EU14 171 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 IFNA17P01571 189 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 ANXA3P12429 323 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 VAMP1P23763 118 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 KLF5Q13887 457 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 ANKRD55Q3KP44 614 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 C9orf66Q5T8R8 295 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 SLC25A24Q6NUK1 477 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 LYZL2Q7Z4W2 148 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 LGI3Q8N145 548 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 S100ZQ8WXG8 99 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 EEF1AKMT3Q96AZ1 226 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 PLEKHA3Q9HB20 300 aa10.4□□□□□ -0.74
SOX2-OT-229ENST00000598474 A0A0B4J2A0 478 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 INS-IGF2F8WCM5 200 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 LYRM1O43325 122 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 SFT2D2O95562 160 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 HLA-AP01891 365 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 SYNJ2BPP57105 145 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 SRPXP78539 464 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 RPEL1Q2QD12 228 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 NMSQ5H8A3 153 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 ACSM6Q6P461 480 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 ZNF114Q8NC26 417 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 OR1P1Q8NH06 330 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 ZNF502Q8TBZ5 544 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 CXorf58Q96LI9 332 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 PDCD10Q9BUL8 212 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 AURKAIP1Q9NWT8 199 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 THYN1Q9P016 225 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 SHPKQ9UHJ6 478 aa10.39□□□□□ -0.75
SOX2-OT-229ENST00000598474 NOTCH1P46531 2555 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 TRBV7-1A0A0A6YYK4 115 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 IGHV3-21A0A0B4J1V1 117 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 K7EIM0 57 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 CYB5BO43169 146 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 SAP30O75446 220 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 HOXA1P49639 335 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 PDLIM3Q53GG5 364 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 FAM209BQ5JX69 171 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 CLEC19AQ6UXS0 136 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 LRTM2Q8N967 370 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 OR52E5Q8NH55 327 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 VN1R17PQ8TDU5 208 aa10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 WDR12Q9GZL7 423 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-229ENST00000598474 DNAH3Q8TD57 4116 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 NXPH3O95157 252 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 SULT1A3P0DMM9 295 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 SULT1A4P0DMN0 295 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 GPR183P32249 361 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 ARL3P36405 182 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 INSL3P51460 131 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 SPCS3P61009 180 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 UBE2MP61081 183 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 ERHP84090 104 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 ZNF846Q147U1 533 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 IL34Q6ZMJ4 242 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 OR9G4Q8NGQ1 327 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 OR1L6Q8NGR2 347 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 ZC4H2Q9NQZ6 224 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 TBC1D24Q9ULP9 559 aa10.37□□□□□ -0.75
SOX2-OT-229ENST00000598474 DUXBA0A1W2PPF3 345 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 C9orf170A2RU37 121 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 GGCTO75223 188 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 OR2C1O95371 312 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 CLEC3BP05452 202 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 RNASE2P10153 161 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 ANXA7P20073 488 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 SMCO1Q147U7 214 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 C11orf87Q6NUJ2 197 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 REC114Q7Z4M0 266 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 SCARB1Q8WTV0 552 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms