RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 ZNF114Q8NC26 417 aa12.64□□□□□ -0.39
USHBP1-208ENST00000598309 OR1P1Q8NH06 330 aa12.64□□□□□ -0.39
USHBP1-208ENST00000598309 SLC2A8Q9NY64 477 aa12.64□□□□□ -0.39
USHBP1-208ENST00000598309 C14orf166Q9Y224 244 aaKnown RBP12.64□□□□□ -0.39
USHBP1-208ENST00000598309 FABP12A6NFH5 140 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 A8MZ25 164 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 ZNF701M0R085 212 aaPredicted RBP12.63□□□□□ -0.39
USHBP1-208ENST00000598309 IGKV1-5P01602 117 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 FOLR2P14207 255 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 GPR183P32249 361 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 AKR1C2P52895 323 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 MFAP2P55001 183 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 HSPE1P61604 102 aaKnown RBP12.63□□□□□ -0.39
USHBP1-208ENST00000598309 SGPP2Q8IWX5 399 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 OR2C3Q8N628 320 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 DYNLRB2Q8TF09 96 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 RBM38Q9H0Z9 239 aaKnown RBP12.63□□□□□ -0.39
USHBP1-208ENST00000598309 TECRQ9NZ01 308 aaKnown RBP12.63□□□□□ -0.39
USHBP1-208ENST00000598309 U3KQK5 164 aa12.63□□□□□ -0.39
USHBP1-208ENST00000598309 TMEM213A2RRL7 107 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 CCDC160A6NGH7 325 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 TGOLN2O43493 480 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 FRMD6-AS1P0C7T7 363 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 TRIM16LQ309B1 348 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 SPSB3Q6PJ21 355 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 PLET1Q6UQ28 207 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 GTSCR1Q86UQ5 136 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 RTBDNQ9BSG5 229 aaPredicted RBP12.62□□□□□ -0.39
USHBP1-208ENST00000598309 C5orf66Q9H5L9 145 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 PLEKHA3Q9HB20 300 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 C21orf62Q9NYP8 219 aa12.62□□□□□ -0.39
USHBP1-208ENST00000598309 COL7A1Q02388 2944 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 K7EIM0 57 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 DEFB114Q30KQ6 69 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 SP6Q3SY56 376 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 CD300EQ496F6 205 aaPredicted RBP12.61□□□□□ -0.39
USHBP1-208ENST00000598309 OR51S1Q8NGJ8 323 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 SCARB1Q8WTV0 552 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 BSCL2Q96G97 398 aaPredicted RBP12.61□□□□□ -0.39
USHBP1-208ENST00000598309 ASCL2Q99929 193 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 ZNF436Q9C0F3 470 aaPredicted RBP12.61□□□□□ -0.39
USHBP1-208ENST00000598309 TMEM222Q9H0R3 208 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 NAA60Q9H7X0 242 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 PALMDQ9NP74 551 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 SCP2D1Q9UJQ7 156 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 GPR132Q9UNW8 380 aa12.61□□□□□ -0.39
USHBP1-208ENST00000598309 A0A0B4J293 547 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 TEX13DA0A0J9YY54 714 aaPredicted RBP12.6□□□□□ -0.39
USHBP1-208ENST00000598309 ZNF320A2RRD8 509 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 IZUMO1RA6ND01 250 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 INS-IGF2F8WCM5 200 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 OR5AC1P0C628 307 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 IGHV4-30-4P0DP06 118 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 CBLN1P23435 193 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 ELLP55199 621 aaPredicted RBP12.6□□□□□ -0.39
USHBP1-208ENST00000598309 ERHP84090 104 aaKnown RBP12.6□□□□□ -0.39
USHBP1-208ENST00000598309 IZUMO4Q1ZYL8 232 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 FAM219AQ8IW50 185 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 MARC2Q969Z3 335 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 RRNAD1Q96FB5 475 aaKnown RBP12.6□□□□□ -0.39
USHBP1-208ENST00000598309 WWC2-AS2Q96NR7 200 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 SCGB3A2Q96PL1 93 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 C19orf73Q9NVV2 129 aa12.6□□□□□ -0.39
USHBP1-208ENST00000598309 GAR1Q9NY12 217 aaKnown RBP12.6□□□□□ -0.39
USHBP1-208ENST00000598309 CRYM-AS1A6NIL9 109 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 CDS2O95674 445 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 S100A5P33763 92 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 DHODHQ02127 395 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 UNQ9165/PRO28630Q6UXU0 137 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 SLC35G3Q8N808 338 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
USHBP1-208ENST00000598309 GLYATL2Q8WU03 294 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 TMEM190Q8WZ59 177 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 PDCD10Q9BUL8 212 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 UFC1Q9Y3C8 167 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 V9GYH0 126 aa12.59□□□□□ -0.39
USHBP1-208ENST00000598309 OR2T8A6NH00 312 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 F8W735 103 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-208ENST00000598309 I3L2K1 104 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 ST8SIA3O43173 380 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 C8orf88P0DMB2 117 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 EDN2P20800 178 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 FCGR2BP31994 310 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-208ENST00000598309 FAUP35544 74 aaKnown RBP12.58□□□□□ -0.4
USHBP1-208ENST00000598309 AARDQ4LEZ3 155 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 UXS1Q8NBZ7 420 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 CACNG8Q8WXS5 425 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 RBPMSQ93062 196 aaKnown RBP12.58□□□□□ -0.4
USHBP1-208ENST00000598309 TRIM63Q969Q1 353 aa12.58□□□□□ -0.4
USHBP1-208ENST00000598309 IGHV3-21A0A0B4J1V1 117 aa12.57□□□□□ -0.4
USHBP1-208ENST00000598309 A0A0G2JRQ6 117 aa12.57□□□□□ -0.4
USHBP1-208ENST00000598309 ZNF785A8K8V0 405 aa12.57□□□□□ -0.4
USHBP1-208ENST00000598309 NDUFA4O00483 81 aa12.57□□□□□ -0.4
USHBP1-208ENST00000598309 IFNA17P01571 189 aa12.57□□□□□ -0.4
USHBP1-208ENST00000598309 AP3S2P59780 193 aa12.57□□□□□ -0.4
USHBP1-208ENST00000598309 KLF9Q13886 244 aaPredicted RBP12.57□□□□□ -0.4
USHBP1-208ENST00000598309 TM4SF20Q53R12 229 aa12.57□□□□□ -0.4
USHBP1-208ENST00000598309 PYDC2Q56P42 97 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms