RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 VSIRQ9H7M9 311 aa7.79□□□□□ -1.16
ZNF548-207ENST00000597400 SCRT2Q9NQ03 307 aa7.79□□□□□ -1.16
ZNF548-207ENST00000597400 NDUFA4L2Q9NRX3 87 aa7.79□□□□□ -1.16
ZNF548-207ENST00000597400 TRAV14DV4A0A0A6YYC5 116 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 RBFOX2O43251 390 aaKnown RBP eCLIP7.78□□□□□ -1.16
ZNF548-207ENST00000597400 SSX5O60225 188 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 YIF1AO95070 293 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 IGHV3-48P01763 117 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 TRAPPC2P0DI81 140 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 TRAPPC2BP0DI82 140 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 SSX1Q16384 188 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 C1orf134Q5TEV5 83 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 DHRSXQ8N5I4 330 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 SECTM1Q8WVN6 248 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 UFD1Q92890 307 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 NXF2Q9GZY0 626 aaKnown RBP7.78□□□□□ -1.16
ZNF548-207ENST00000597400 TBC1D24Q9ULP9 559 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 NSG2Q9Y328 171 aa7.78□□□□□ -1.16
ZNF548-207ENST00000597400 TMEM235A6NFC5 223 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 DBX1A6NMT0 343 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 I3L2K1 104 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 ST8SIA3O43173 380 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 ARL6IP5O75915 188 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 HPRT1P00492 218 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 FGF2P09038 288 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 CTXN2P0C2S0 81 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 SPP1P10451 314 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 NQO2P16083 231 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 RAB6AP20340 208 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 RELQ04864 619 aaPredicted RBP7.77□□□□□ -1.17
ZNF548-207ENST00000597400 THOC7Q6I9Y2 204 aaKnown RBP7.77□□□□□ -1.17
ZNF548-207ENST00000597400 MORN3Q6PF18 240 aaPredicted RBP7.77□□□□□ -1.17
ZNF548-207ENST00000597400 CNIH2Q6PI25 160 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 C8orf59Q8N0T1 100 aaPredicted RBP7.77□□□□□ -1.17
ZNF548-207ENST00000597400 OR13F1Q8NGS4 319 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 LSM10Q969L4 123 aaKnown RBP7.77□□□□□ -1.17
ZNF548-207ENST00000597400 CMTM3Q96MX0 182 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 CENPOQ9BU64 300 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 HINT2Q9BX68 163 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 DCSTAMPQ9H295 470 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 ZFAND3Q9H8U3 227 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 TMEM14BQ9NUH8 114 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 ANXA10Q9UJ72 324 aa7.77□□□□□ -1.17
ZNF548-207ENST00000597400 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 IFITM5A6NNB3 132 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 K7EQG2 157 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 ZNF688P0C7X2 276 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 PAFAH1B2P68402 229 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 CDNFQ49AH0 187 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 SOHLH1Q5JUK2 328 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 UBE2UQ5VVX9 321 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 HACD4Q5VWC8 232 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 TOMM20LQ6UXN7 152 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 ZNF818PQ6ZRF7 136 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 DMBX1Q8NFW5 382 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 OR51H1Q8NH63 302 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 ATG5Q9H1Y0 275 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 RABAC1Q9UI14 185 aa7.76□□□□□ -1.17
ZNF548-207ENST00000597400 VPS13BQ7Z7G8 4022 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 MARCH11A6NNE9 402 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 PTGES3LE9PB15 166 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 DNASE2O00115 360 aaPredicted RBP7.75□□□□□ -1.17
ZNF548-207ENST00000597400 CYB5BO43169 146 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 IFNA21P01568 189 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 IFNA17P01571 189 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 HSMCR30P0CW71 290 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 MSMO1Q15800 293 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 TMEM41BQ5BJD5 291 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 ACTL10Q5JWF8 245 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 HSD17B13Q7Z5P4 300 aaPredicted RBP7.75□□□□□ -1.17
ZNF548-207ENST00000597400 OR1L8Q8NGR8 309 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 DCANP1Q8TF63 244 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 SLC25A46Q96AG3 418 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 PLEKHA2Q9HB19 425 aa7.75□□□□□ -1.17
ZNF548-207ENST00000597400 A0A1B0GU03 582 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 SMIM30A4D0T7 59 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 PPYP01298 95 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 FCGR2CP31995 323 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 RPL11P62913 178 aaKnown RBP7.74□□□□□ -1.17
ZNF548-207ENST00000597400 CENPSQ8N2Z9 138 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 STXBP6Q8NFX7 210 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 OR1P1Q8NH06 330 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 MISP3Q96FF7 219 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 AIFM2Q9BRQ8 373 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 COMMD9Q9P000 198 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 OR51B2Q9Y5P1 312 aa7.74□□□□□ -1.17
ZNF548-207ENST00000597400 METTL21EPA6NDL7 271 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 MT-CO2P00403 227 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 EIF4EP06730 217 aaKnown RBP7.73□□□□□ -1.17
ZNF548-207ENST00000597400 MFAP4P55083 255 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 FXYD4P59646 89 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 CATR1Q13166 79 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 TRAM1Q15629 374 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 RNF212Q495C1 297 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 GRAMD2BQ96HH9 432 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 GINS3Q9BRX5 216 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 SLC5A7Q9GZV3 580 aa7.73□□□□□ -1.17
ZNF548-207ENST00000597400 PUS1Q9Y606 427 aaKnown RBP eCLIP7.73□□□□□ -1.17
ZNF548-207ENST00000597400 GNG7O60262 68 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms