RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 DLX4Q92988 240 aaPredicted RBP13.93□□□□□ -0.18
IRF3-216ENST00000597180 F11RQ9Y624 299 aaKnown RBP13.93□□□□□ -0.18
IRF3-216ENST00000597180 PLA2G10O15496 165 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 ST8SIA3O43173 380 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 TRBV12-3P01733 135 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 ZP3P21754 424 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 HOXD3P31249 432 aaPredicted RBP13.92□□□□□ -0.18
IRF3-216ENST00000597180 SRPXP78539 464 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 DEFA6Q01524 100 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 Q6ZRM9 215 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 CENPSQ8N2Z9 138 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 OR2C3Q8N628 320 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 SLC35G3Q8N808 338 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 PRR13Q9NZ81 148 aa13.92□□□□□ -0.18
IRF3-216ENST00000597180 A0A0B4J2A0 478 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 INS-IGF2F8WCM5 200 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 OVOL1O14753 267 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 CYB5BO43169 146 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 MECP2P51608 486 aaKnown RBP13.91□□□□□ -0.18
IRF3-216ENST00000597180 MFAP2P55001 183 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 UBE2MP61081 183 aaKnown RBP13.91□□□□□ -0.18
IRF3-216ENST00000597180 LGI3Q8N145 548 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 ZNF114Q8NC26 417 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 GPR146Q96CH1 333 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 PLEKHA3Q9HB20 300 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 THYN1Q9P016 225 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 SHPKQ9UHJ6 478 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 MEGF8Q7Z7M0 2845 aa13.91□□□□□ -0.18
IRF3-216ENST00000597180 PIGBOS1A0A0B4J2F0 54 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 SEC14L6B5MCN3 397 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 LYRM1O43325 122 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 EGFEM1PQ0D2K5 195 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 PPP1R1AQ13522 171 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 C9orf66Q5T8R8 295 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 OR1L6Q8NGR2 347 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 OR52E5Q8NH55 327 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 CXorf58Q96LI9 332 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 CCDC140Q96MF4 163 aa13.9□□□□□ -0.18
IRF3-216ENST00000597180 WDR12Q9GZL7 423 aaKnown RBP13.9□□□□□ -0.18
IRF3-216ENST00000597180 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.9□□□□□ -0.18
IRF3-216ENST00000597180 DUXBA0A1W2PPF3 345 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 BMPR1BO00238 502 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 SFT2D2O95562 160 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 IFNA17P01571 189 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 VAMP1P23763 118 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 KLF5Q13887 457 aaPredicted RBP13.89□□□□□ -0.19
IRF3-216ENST00000597180 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 PDLIM3Q53GG5 364 aaPredicted RBP13.89□□□□□ -0.19
IRF3-216ENST00000597180 NMSQ5H8A3 153 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 LRTM2Q8N967 370 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 OR1P1Q8NH06 330 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 EEF1AKMT3Q96AZ1 226 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 PDCD10Q9BUL8 212 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 CACNG5Q9UF02 275 aa13.89□□□□□ -0.19
IRF3-216ENST00000597180 TRBV7-1A0A0A6YYK4 115 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 MFSD2BA6NFX1 497 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 SPCS3P61009 180 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 ERHP84090 104 aaKnown RBP13.88□□□□□ -0.19
IRF3-216ENST00000597180 ANKRD55Q3KP44 614 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 SPINK9Q5DT21 86 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 SLC25A24Q6NUK1 477 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 LYZL2Q7Z4W2 148 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 VN1R17PQ8TDU5 208 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 FLVCR2Q9UPI3 526 aa13.88□□□□□ -0.19
IRF3-216ENST00000597180 SULT1A3P0DMM9 295 aa13.87□□□□□ -0.19
IRF3-216ENST00000597180 SULT1A4P0DMN0 295 aa13.87□□□□□ -0.19
IRF3-216ENST00000597180 INSL3P51460 131 aa13.87□□□□□ -0.19
IRF3-216ENST00000597180 RPEL1Q2QD12 228 aa13.87□□□□□ -0.19
IRF3-216ENST00000597180 ACSM6Q6P461 480 aa13.87□□□□□ -0.19
IRF3-216ENST00000597180 ZNF502Q8TBZ5 544 aa13.87□□□□□ -0.19
IRF3-216ENST00000597180 CACFD1Q9UGQ2 172 aa13.87□□□□□ -0.19
IRF3-216ENST00000597180 S4R3C0 116 aa13.87□□□□□ -0.19
IRF3-216ENST00000597180 PPP5D1E7EU14 171 aa13.86□□□□□ -0.19
IRF3-216ENST00000597180 IGHV3-23P01764 117 aa13.86□□□□□ -0.19
IRF3-216ENST00000597180 KRTAP10-11P60412 298 aa13.86□□□□□ -0.19
IRF3-216ENST00000597180 CLEC19AQ6UXS0 136 aa13.86□□□□□ -0.19
IRF3-216ENST00000597180 DNAH3Q8TD57 4116 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 C9orf170A2RU37 121 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 K7EIM0 57 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 GGCTO75223 188 aaKnown RBP13.85□□□□□ -0.19
IRF3-216ENST00000597180 UPK1BO75841 260 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 HOXA1P49639 335 aaPredicted RBP13.85□□□□□ -0.19
IRF3-216ENST00000597180 SMCO1Q147U7 214 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 PVRIGQ6DKI7 326 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 REC114Q7Z4M0 266 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 C20orf85Q9H1P6 137 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 ENY2Q9NPA8 101 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 TBC1D24Q9ULP9 559 aa13.85□□□□□ -0.19
IRF3-216ENST00000597180 A0A1B0GU03 582 aa13.84□□□□□ -0.19
IRF3-216ENST00000597180 HLA-AP01891 365 aaKnown RBP13.84□□□□□ -0.19
IRF3-216ENST00000597180 OR4E1P0C645 316 aa13.84□□□□□ -0.19
IRF3-216ENST00000597180 RNASE2P10153 161 aaKnown RBP13.84□□□□□ -0.19
IRF3-216ENST00000597180 SLC25A6P12236 298 aa13.84□□□□□ -0.19
IRF3-216ENST00000597180 ANXA7P20073 488 aaKnown RBP13.84□□□□□ -0.19
IRF3-216ENST00000597180 ARL3P36405 182 aa13.84□□□□□ -0.19
IRF3-216ENST00000597180 SYNJ2BPP57105 145 aa13.84□□□□□ -0.19
IRF3-216ENST00000597180 DHRS2Q13268 280 aa13.84□□□□□ -0.19
IRF3-216ENST00000597180 ASAH1Q13510 395 aa13.84□□□□□ -0.19
IRF3-216ENST00000597180 TATDN3Q17R31 274 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms