RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 E7EUB6 86 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 M0QZK8 103 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 FGF16O43320 207 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 IGHV4-59P01825 116 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 HTR2BP41595 481 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 SUB1P53999 127 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 CX3CL1P78423 397 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 EWSR1Q01844 656 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 NHLH2Q02577 135 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 BAXQ07812 192 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 SCGB2A2Q13296 93 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 C12orf54Q6X4T0 127 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 RBMS3Q6XE24 437 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 HSD17B13Q7Z5P4 300 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 STX12Q86Y82 276 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 C5orf56Q8N8D9 126 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 OR10W1Q8NGF6 305 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 ABHD5Q8WTS1 349 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 ZNF48Q96MX3 618 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 ARPC5LQ9BPX5 153 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 TNFRSF19Q9NS68 423 aa10.36□□□□□ -0.75
SHKBP1-209ENST00000595803 CGB1A6NKQ9 187 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 INS-IGF2F8WCM5 200 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 TAAR5O14804 337 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 CST7O76096 145 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 SCAF4O95104 1147 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 HLA-DRB1P01911 266 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 OR8U8P0C7N1 319 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 METTL15P1P0C7V9 234 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 OR13C7P0DN81 318 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 SRD5A1P18405 259 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 SULT1A1P50225 295 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 TMEM267Q0VDI3 215 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 HIST2H2BDQ6DRA6 164 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 TMEM14EPQ6UXP3 125 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 SIGLECL1Q8N7X8 197 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 SLC24A4Q8NFF2 622 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 OR1S2Q8NGQ3 325 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 SSMEM1Q8WWF3 244 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 OR4C12Q96R67 309 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 SRSF8Q9BRL6 282 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 SMIM3Q9BZL3 60 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 NBEAL2Q6ZNJ1 2754 aa10.35□□□□□ -0.75
SHKBP1-209ENST00000595803 TET2Q6N021 2002 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 BCL2L11O43521 198 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 IFNA4P05014 189 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 NPY1RP25929 384 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 HBG1P69891 147 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 HBG2P69892 147 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 C9orf152Q5JTZ5 239 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 ETV3LQ6ZN32 361 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 TMEM217Q8N7C4 229 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 OR10P1Q8NGE3 313 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 SGMS2Q8NHU3 365 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 ARPC1AQ92747 370 aa10.34□□□□□ -0.75
SHKBP1-209ENST00000595803 A0A1B0GW64 132 aa10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 SH2D7A6NKC9 451 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 C15orf62A8K5M9 175 aa10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 HOXA3O43365 443 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 SSBP2P81877 361 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 WT1-ASQ06250 92 aa10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 ATP6V1FQ16864 119 aa10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 OR8G2PQ6IF36 304 aa10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 BSCL2Q96G97 398 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 FAM103A1Q9BTL3 118 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 FBXL17Q9UF56 701 aa10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 TRRAPQ9Y4A5 3859 aa10.33□□□□□ -0.76
SHKBP1-209ENST00000595803 BORCS7-ASMTA0A0B4J1R7 106 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 IGLC7A0M8Q6 106 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 TEX22C9J3V5 150 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 DFFBO76075 338 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 REG1AP05451 166 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 APELAP0DMC3 54 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 RNASE2P10153 161 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 AREGP15514 252 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 EIF5AP63241 154 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 DEFA6Q01524 100 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 C2orf83Q53S99 150 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 SLC51BQ86UW2 128 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 LILRB2Q8N423 598 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 TMEM86BQ8N661 226 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 OR5C1Q8NGR4 320 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 PINX1Q96BK5 328 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 ZNF471Q9BX82 626 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 PARP11Q9NR21 331 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 VPREB3Q9UKI3 123 aa10.32□□□□□ -0.76
SHKBP1-209ENST00000595803 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 AMY1AP04745 511 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 SLC38A11Q08AI6 406 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 ARL16Q0P5N6 197 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 CLINT1Q14677 625 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 SLC25A24Q6NUK1 477 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 TMEM68Q96MH6 324 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 P2RX4Q99571 388 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 HSPB9Q9BQS6 159 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 GON7Q9BXV9 100 aa10.31□□□□□ -0.76
SHKBP1-209ENST00000595803 WNT10AQ9GZT5 417 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms