RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 LYG2Q86SG7 212 aa17.69■□□□□ 0.42
PNKP-205ENST00000595081 LRTM2Q8N967 370 aa17.69■□□□□ 0.42
PNKP-205ENST00000595081 NECAP1Q8NC96 275 aa17.69■□□□□ 0.42
PNKP-205ENST00000595081 PDCD10Q9BUL8 212 aa17.69■□□□□ 0.42
PNKP-205ENST00000595081 PLEKHA3Q9HB20 300 aa17.69■□□□□ 0.42
PNKP-205ENST00000595081 FBXL7Q9UJT9 491 aa17.69■□□□□ 0.42
PNKP-205ENST00000595081 IGHV4OR15-8A0A075B7B6 117 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 A0A087WW49 117 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 NXPH3O95157 252 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 NDUFB8O95169 186 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 SULT1A3P0DMM9 295 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 SULT1A4P0DMN0 295 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 ATP5G2Q06055 141 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 FHL3Q13643 280 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 C15orf32Q32M92 178 aa17.68■□□□□ 0.42
PNKP-205ENST00000595081 ANKRD34BA5PLL1 514 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 CD33P20138 364 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 MFAP2P55001 183 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 ZNF616Q08AN1 781 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 EXOSC2Q13868 293 aaKnown RBP17.67■□□□□ 0.42
PNKP-205ENST00000595081 KLK9Q2XQG4 91 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 AARDQ4LEZ3 155 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 ZNF343Q6P1L6 599 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 OR2C3Q8N628 320 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 OR52B4Q8NGK2 314 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 ENKURQ8TC29 256 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 DPF1Q92782 380 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 KLK9Q9UKQ9 250 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 F11RQ9Y624 299 aaKnown RBP17.67■□□□□ 0.42
PNKP-205ENST00000595081 S4R3C0 116 aa17.67■□□□□ 0.42
PNKP-205ENST00000595081 DUXBA0A1W2PPF3 345 aa17.66■□□□□ 0.42
PNKP-205ENST00000595081 TRBV12-3P01733 135 aa17.66■□□□□ 0.42
PNKP-205ENST00000595081 HOXB5P09067 269 aa17.66■□□□□ 0.42
PNKP-205ENST00000595081 H2AFB2P0C5Z0 115 aa17.66■□□□□ 0.42
PNKP-205ENST00000595081 HIST1H1BP16401 226 aaKnown RBP17.66■□□□□ 0.42
PNKP-205ENST00000595081 HOXA1P49639 335 aaPredicted RBP17.66■□□□□ 0.42
PNKP-205ENST00000595081 WFDC9Q8NEX5 89 aa17.66■□□□□ 0.42
PNKP-205ENST00000595081 NOTCH3Q9UM47 2321 aa17.65■□□□□ 0.42
PNKP-205ENST00000595081 FBN3Q75N90 2809 aa17.65■□□□□ 0.42
PNKP-205ENST00000595081 PIGBOS1A0A0B4J2F0 54 aa17.65■□□□□ 0.42
PNKP-205ENST00000595081 DUS4LO95620 317 aaKnown RBP17.65■□□□□ 0.42
PNKP-205ENST00000595081 IGHV3-23P01764 117 aa17.65■□□□□ 0.42
PNKP-205ENST00000595081 HSPB1P04792 205 aaKnown RBP17.65■□□□□ 0.42
PNKP-205ENST00000595081 SPCS3P61009 180 aa17.65■□□□□ 0.42
PNKP-205ENST00000595081 SMCO1Q147U7 214 aa17.65■□□□□ 0.42
PNKP-205ENST00000595081 SLC25A24Q6NUK1 477 aa17.65■□□□□ 0.42
PNKP-205ENST00000595081 NRARPQ7Z6K4 114 aa17.65■□□□□ 0.42
PNKP-205ENST00000595081 MFSD2BA6NFX1 497 aa17.64■□□□□ 0.41
PNKP-205ENST00000595081 LINC01619G3V211 115 aa17.64■□□□□ 0.41
PNKP-205ENST00000595081 OR8U8P0C7N1 319 aa17.64■□□□□ 0.41
PNKP-205ENST00000595081 SLURP1P55000 103 aa17.64■□□□□ 0.41
PNKP-205ENST00000595081 ERHP84090 104 aaKnown RBP17.64■□□□□ 0.41
PNKP-205ENST00000595081 OR52E5Q8NH55 327 aa17.64■□□□□ 0.41
PNKP-205ENST00000595081 COQ8AQ8NI60 647 aa17.64■□□□□ 0.41
PNKP-205ENST00000595081 A0A1B0GU03 582 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 CYB5BO43169 146 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 ADAP1O75689 374 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 DEFA1P59665 94 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 DEFA3P59666 94 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 GGNBP1Q5YKI7 109 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 OR1P1Q8NH06 330 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 SEC22CQ9BRL7 303 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 RANGRFQ9HD47 186 aaPredicted RBP17.63■□□□□ 0.41
PNKP-205ENST00000595081 ENY2Q9NPA8 101 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 PEF1Q9UBV8 284 aaKnown RBP17.63■□□□□ 0.41
PNKP-205ENST00000595081 TMED3Q9Y3Q3 217 aa17.63■□□□□ 0.41
PNKP-205ENST00000595081 INS-IGF2F8WCM5 200 aa17.62■□□□□ 0.41
PNKP-205ENST00000595081 IGLL1P15814 213 aa17.62■□□□□ 0.41
PNKP-205ENST00000595081 PDLIM3Q53GG5 364 aaPredicted RBP17.62■□□□□ 0.41
PNKP-205ENST00000595081 C11orf87Q6NUJ2 197 aa17.62■□□□□ 0.41
PNKP-205ENST00000595081 ZNF114Q8NC26 417 aa17.62■□□□□ 0.41
PNKP-205ENST00000595081 OR1S1Q8NH92 325 aa17.62■□□□□ 0.41
PNKP-205ENST00000595081 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.61■□□□□ 0.41
PNKP-205ENST00000595081 IGHV3-21A0A0B4J1V1 117 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 CEBPZOSA8MTT3 80 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 HOXD3P31249 432 aaPredicted RBP17.61■□□□□ 0.41
PNKP-205ENST00000595081 TNFRSF9Q07011 255 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 OXLD1Q5BKU9 147 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 DUSP18Q8NEJ0 188 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 MITD1Q8WV92 249 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 DCUN1D4Q92564 292 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 EEF1AKMT3Q96AZ1 226 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 CCDC140Q96MF4 163 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 THYN1Q9P016 225 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 NOTCH1P46531 2555 aa17.61■□□□□ 0.41
PNKP-205ENST00000595081 G3V4G9 280 aa17.6■□□□□ 0.41
PNKP-205ENST00000595081 PITX3O75364 302 aa17.6■□□□□ 0.41
PNKP-205ENST00000595081 SNCAP37840 140 aa17.6■□□□□ 0.41
PNKP-205ENST00000595081 C1QL4Q86Z23 238 aa17.6■□□□□ 0.41
PNKP-205ENST00000595081 OR1L6Q8NGR2 347 aa17.6■□□□□ 0.41
PNKP-205ENST00000595081 DLX4Q92988 240 aaPredicted RBP17.6■□□□□ 0.41
PNKP-205ENST00000595081 MISP3Q96FF7 219 aa17.6■□□□□ 0.41
PNKP-205ENST00000595081 HSPB7Q9UBY9 170 aa17.6■□□□□ 0.41
PNKP-205ENST00000595081 MPTX1A8MV57 137 aa17.59■□□□□ 0.41
PNKP-205ENST00000595081 PPP5D1E7EU14 171 aa17.59■□□□□ 0.41
PNKP-205ENST00000595081 BMPR1BO00238 502 aa17.59■□□□□ 0.41
PNKP-205ENST00000595081 RNASE2P10153 161 aaKnown RBP17.59■□□□□ 0.41
PNKP-205ENST00000595081 SLC25A6P12236 298 aa17.59■□□□□ 0.41
PNKP-205ENST00000595081 CLEC19AQ6UXS0 136 aa17.59■□□□□ 0.41
PNKP-205ENST00000595081 ZNF431Q8TF32 576 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms