RNA–Protein interactions for RNA: ENST00000593257.1

TRMT1-223, Transcript of tRNA methyltransferase 1, human

TSL 4

Gene TRMT1, Length 408 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-223	ENST00000593257	IGHV1-69	P01742	117 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	OPRK1	P41145	380 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	GNB1	P62873	340 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	AKR1C1	Q04828	323 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	WT1-AS	Q06250	92 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	FFAR4	Q5NUL3	377 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	DYNAP	Q8N1N2	210 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257		Q8N6K4	173 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	BPIFC	Q8NFQ6	507 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257	RPRM	Q9NS64	109 aa		13.42	□□□□□ -0.26
TRMT1-223	ENST00000593257		A0A1B0GW64	132 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257		E7EUB6	86 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	TMEM11	P17152	192 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	ELL	P55199	621 aa	Predicted RBP	13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	CD69	Q07108	199 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	HNF4G	Q14541	408 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	PEA15	Q15121	130 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	C5orf64	Q2M2E5	130 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	ETFRF1	Q6IPR1	90 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	TEPP	Q6URK8	271 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	TMEM144	Q7Z5S9	345 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	LINC01356	Q8N9X3	169 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	MBD3L1	Q8WWY6	194 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	SRSF12	Q8WXF0	261 aa	Known RBP	13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	MBD6	Q96DN6	1003 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	SLC35E1	Q96K37	410 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	P2RX4	Q99571	388 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	TREM1	Q9NP99	234 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	LSM4	Q9Y4Z0	139 aa	Known RBP	13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	SPTAN1	Q13813	2472 aa	Known RBP	13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	FLNC	Q14315	2725 aa		13.41	□□□□□ -0.26
TRMT1-223	ENST00000593257	CORT	O00230	105 aa		13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	CNIH1	O95406	144 aa		13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	LOXL1	Q08397	574 aa	Predicted RBP	13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	PVRIG	Q6DKI7	326 aa		13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	SLC16A13	Q7RTY0	426 aa		13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	SFT2D1	Q8WV19	159 aa		13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	C17orf50	Q8WW18	174 aa		13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	NARS2	Q96I59	477 aa	Known RBP	13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	AJUBA	Q96IF1	538 aa		13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.4	□□□□□ -0.26
TRMT1-223	ENST00000593257	AGPAT2	O15120	278 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	CYB5B	O43169	146 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	M6PR	P20645	277 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	KRTAP10-9	P60411	292 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	ACSM6	Q6P461	480 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	SPSB3	Q6PJ21	355 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	OR10G4	Q8NGN3	311 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	OR10G9	Q8NGN4	311 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	OR10G7	Q8NGN6	311 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	OR1P1	Q8NH06	330 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	RCC1L	Q96I51	464 aa	Known RBP	13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	LINC00052	Q96N35	136 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	PSMG3-AS1	Q96PY0	264 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	MGST2	Q99735	147 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	GGTLC1	Q9BX51	225 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	SMDT1	Q9H4I9	107 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	C7orf69	Q9H7B7	122 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257	SLC39A9	Q9NUM3	307 aa		13.39	□□□□□ -0.27
TRMT1-223	ENST00000593257		A0A096LNT2	108 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	TMEM218	A2RU14	115 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	TEX22	C9J3V5	150 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257		J3QLI3	93 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	FCN1	O00602	326 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	CD5	P06127	495 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	FXYD3	Q14802	87 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	GUK1	Q16774	197 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	PRSS57	Q6UWY2	283 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	ZNF562	Q6V9R5	426 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	PIP4P2	Q8N4L2	257 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	OR1L6	Q8NGR2	347 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	VSIR	Q9H7M9	311 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	HIF1AN	Q9NWT6	349 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	AKAP6	Q13023	2319 aa		13.38	□□□□□ -0.27
TRMT1-223	ENST00000593257	CTXND1	A0A1B0GTU2	59 aa		13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	NCBP2L	A6PVI3	153 aa	Known RBP	13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	AREG	P15514	252 aa		13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	CD24	P25063	80 aa		13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	RPL29	P47914	159 aa	Known RBP	13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	GAMT	Q14353	236 aa		13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	CCDC28A	Q8IWP9	274 aa		13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	ABHD5	Q8WTS1	349 aa		13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	F11R	Q9Y624	299 aa	Known RBP	13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	PXMP4	Q9Y6I8	212 aa		13.37	□□□□□ -0.27
TRMT1-223	ENST00000593257	DCHS2	Q6V1P9	2916 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	TRAV40	A0A0B4J280	105 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	MAP1LC3B2	A6NCE7	125 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	PAX6	P26367	422 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	SSBP2	P81877	361 aa	Predicted RBP	13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	RPP25L	Q8N5L8	163 aa	Known RBP	13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	SSMEM1	Q8WWF3	244 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	C22orf15	Q8WYQ4	148 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	MAP1LC3B	Q9GZQ8	125 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	EIF5A2	Q9GZV4	153 aa	Known RBP	13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	MEGF9	Q9H1U4	602 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	FAM96B	Q9Y3D0	163 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	TNC	P24821	2201 aa		13.36	□□□□□ -0.27
TRMT1-223	ENST00000593257	RBFOX3	A6NFN3	312 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms