RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 A0A1W2PRX2 142 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 CFPP27918 469 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 ZNF497Q6ZNH5 498 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 NPIPB3Q92617 1050 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 NABP1Q96AH0 204 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 COLCA2A8K830 154 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 TM4SF5O14894 197 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 QRFPP83859 136 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 ZNF324BQ6AW86 544 aaPredicted RBP10.66□□□□□ -0.7
DNMT1-228ENST00000592705 SCGB1D4Q6XE38 83 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 IGHV1-2P23083 117 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 GPX4P36969 197 aaPredicted RBP10.66□□□□□ -0.7
DNMT1-228ENST00000592705 RPS20P60866 119 aaKnown RBP10.66□□□□□ -0.7
DNMT1-228ENST00000592705 OR4A47Q6IF82 309 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 FAM181BA6NEQ2 426 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 NUTF2P61970 127 aaKnown RBP10.66□□□□□ -0.7
DNMT1-228ENST00000592705 PSG9Q00887 426 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 SPANXN1Q5VSR9 72 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 ZIC4Q8N9L1 334 aa10.66□□□□□ -0.7
DNMT1-228ENST00000592705 WISP1O95388 367 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 ATP5G3P48201 142 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 DEFB121Q5J5C9 76 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 CUL9Q8IWT3 2517 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 TRAV24A0A0B4J272 114 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 LINC00587B1AMM8 73 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 VDAC2P45880 294 aaPredicted RBP10.65□□□□□ -0.7
DNMT1-228ENST00000592705 SLC25A34Q6PIV7 304 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 HEPN1Q6WQI6 88 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 DUX5Q96PT3 197 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 IGKV1-12A0A0C4DH73 117 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 CGAP01215 116 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 IGKV1D-12P01611 117 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 MBD3L1Q8WWY6 194 aa10.65□□□□□ -0.7
DNMT1-228ENST00000592705 IGFBP2P18065 325 aa10.65□□□□□ -0.71
DNMT1-228ENST00000592705 CKS2P33552 79 aa10.65□□□□□ -0.71
DNMT1-228ENST00000592705 MFAP4P55083 255 aa10.65□□□□□ -0.71
DNMT1-228ENST00000592705 TM4SF20Q53R12 229 aa10.65□□□□□ -0.71
DNMT1-228ENST00000592705 TMEM170AQ8WVE7 144 aa10.65□□□□□ -0.71
DNMT1-228ENST00000592705 K7ERU9 68 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 BTF3P20290 206 aaKnown RBP10.64□□□□□ -0.71
DNMT1-228ENST00000592705 CCL20P78556 96 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 KLHDC3Q9BQ90 382 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 PNRC2Q9NPJ4 139 aaKnown RBP10.64□□□□□ -0.71
DNMT1-228ENST00000592705 ROS1P08922 2347 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 KBTBD11-OT1A0A1B0GTJ5 212 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 NMUP48645 174 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 HBBP68871 147 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 DPH3Q96FX2 82 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 THSD7BQ9C0I4 1608 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 SOD3P08294 240 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 RPL7P18124 248 aaKnown RBP10.64□□□□□ -0.71
DNMT1-228ENST00000592705 TMEM242Q9NWH2 141 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 CACNA1AO00555 2505 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 FCGR2BP31994 310 aaPredicted RBP10.64□□□□□ -0.71
DNMT1-228ENST00000592705 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
DNMT1-228ENST00000592705 SRSF12Q8WXF0 261 aaKnown RBP10.64□□□□□ -0.71
DNMT1-228ENST00000592705 HLA-DRB1P01911 266 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 MGPP08493 103 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 LYL1P12980 280 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 TAS2R60P59551 318 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 PI4KAP42356 2102 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 SLC17A3O00476 420 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
DNMT1-228ENST00000592705 CIDEAO60543 219 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BKO60814 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 REG1AP05451 166 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BJP06899 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BOP23527 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BBP33778 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BDP58876 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BCP62807 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 SRSF6Q13247 344 aaKnown RBP10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST2H2BEQ16778 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 Q5PR19 223 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BHQ93079 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BNQ99877 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 HIST1H2BMQ99879 126 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 DPRXA6NFQ7 191 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 C5orf52A6NGY3 159 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 OR10AG1Q8NH19 301 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 MESP1Q9BRJ9 268 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 J3KRW8 73 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 TRGV3P03979 118 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 RTN4RL2Q86UN3 420 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 C1QL4Q86Z23 238 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 CACNG8Q8WXS5 425 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 SCN8AQ9UQD0 1980 aa10.63□□□□□ -0.71
DNMT1-228ENST00000592705 TRAV1-1A0A0B4J248 108 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 SRSF9Q13242 221 aaKnown RBP eCLIP10.62□□□□□ -0.71
DNMT1-228ENST00000592705 DEPPQ9NTK1 212 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 IGKV1-27A0A075B6S5 117 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 IGKV3D-15A0A087WSY6 115 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 YPEL1O60688 119 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 FGFBP3Q8TAT2 258 aa10.62□□□□□ -0.71
DNMT1-228ENST00000592705 EEF1AKMT3Q96AZ1 226 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms