RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DMRT1Q9Y5R6 373 aa10.65□□□□□ -0.7
CLIP3-205ENST00000592017 NBEAL2Q6ZNJ1 2754 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 CRYM-AS1A6NIL9 109 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 B3GALNT1O75752 331 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 ARL3P36405 182 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 INPP1P49441 399 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 DCTN2Q13561 401 aaKnown RBP10.64□□□□□ -0.71
CLIP3-205ENST00000592017 FAM209BQ5JX69 171 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 SGPP2Q8IWX5 399 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 CXorf58Q96LI9 332 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 SCGB3A2Q96PL1 93 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 PDCD10Q9BUL8 212 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 SRRQ9GZT4 340 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 TMEM222Q9H0R3 208 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 PLEKHA3Q9HB20 300 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 ZC4H2Q9NQZ6 224 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 ZNF256Q9Y2P7 627 aaPredicted RBP10.64□□□□□ -0.71
CLIP3-205ENST00000592017 F11RQ9Y624 299 aaKnown RBP10.64□□□□□ -0.71
CLIP3-205ENST00000592017 TNCP24821 2201 aa10.64□□□□□ -0.71
CLIP3-205ENST00000592017 IGHV3-21A0A0B4J1V1 117 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 A0A0G2JRQ6 117 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 GGCTO75223 188 aaKnown RBP10.63□□□□□ -0.71
CLIP3-205ENST00000592017 IFNA17P01571 189 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 AKR1C4P17516 323 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 GPR183P32249 361 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 ETV6P41212 452 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 PRCDQ00LT1 54 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 TRIQKQ629K1 86 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 TMED4Q7Z7H5 227 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 SLC35G3Q8N808 338 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 LHFPL5Q8TAF8 219 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 TMEM230Q96A57 120 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 PRR13Q9NZ81 148 aa10.63□□□□□ -0.71
CLIP3-205ENST00000592017 TRBV7-1A0A0A6YYK4 115 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 ST8SIA3O43173 380 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 OR2C1O95371 312 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 P0C879 139 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 SPNP16150 400 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 HOXA1P49639 335 aaPredicted RBP10.62□□□□□ -0.71
CLIP3-205ENST00000592017 MFAP2P55001 183 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 HSPE1P61604 102 aaKnown RBP10.62□□□□□ -0.71
CLIP3-205ENST00000592017 DHODHQ02127 395 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 TMEM268Q5VZI3 342 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 GLYATL2Q8WU03 294 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 RBPMSQ93062 196 aaKnown RBP10.62□□□□□ -0.71
CLIP3-205ENST00000592017 MISP3Q96FF7 219 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 PEMTQ9UBM1 199 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 STAB2Q8WWQ8 2551 aa10.62□□□□□ -0.71
CLIP3-205ENST00000592017 A0A0B4J293 547 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 LINC00854A0A1B0GVQ3 168 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 CDS2O95674 445 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 BAK1Q16611 211 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 SELENOHQ8IZQ5 122 aaKnown RBP10.61□□□□□ -0.71
CLIP3-205ENST00000592017 OR2C3Q8N628 320 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 UBAC2Q8NBM4 344 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 ZNF502Q8TBZ5 544 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 ASCL2Q99929 193 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 KCNIP3Q9Y2W7 256 aa10.61□□□□□ -0.71
CLIP3-205ENST00000592017 IGHV3-35A0A0C4DH35 117 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 ZNF320A2RRD8 509 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 CLEC3BP05452 202 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 CSN3P07498 182 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 NHLRC4P0CG21 123 aaPredicted RBP10.6□□□□□ -0.71
CLIP3-205ENST00000592017 GP9P14770 177 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 ERHP84090 104 aaKnown RBP10.6□□□□□ -0.71
CLIP3-205ENST00000592017 IL34Q6ZMJ4 242 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 FAM219AQ8IW50 185 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 OR1L6Q8NGR2 347 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 OR1P1Q8NH06 330 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 VN1R17PQ8TDU5 208 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 ENY2Q9NPA8 101 aa10.6□□□□□ -0.71
CLIP3-205ENST00000592017 OR2T8A6NH00 312 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 NXPH3O95157 252 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 IGLV1-51P01701 117 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 ANXA3P12429 323 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 TMEM187Q14656 261 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 Q56UQ5 140 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 PLET1Q6UQ28 207 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 Q6ZRM9 215 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 DYNLRB2Q8TF09 96 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 DEDD2Q8WXF8 326 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 PINX1Q96BK5 328 aaKnown RBP10.59□□□□□ -0.71
CLIP3-205ENST00000592017 GPR146Q96CH1 333 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 GALNT14Q96FL9 552 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 C21orf62Q9NYP8 219 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 CACNG5Q9UF02 275 aa10.59□□□□□ -0.71
CLIP3-205ENST00000592017 SORL1Q92673 2214 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 K7EIM0 57 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 TGOLN2O43493 480 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 EDN2P20800 178 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 VAMP1P23763 118 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 SNCAP37840 140 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 CCR6P51684 374 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 SUPT4H1P63272 117 aaKnown RBP10.58□□□□□ -0.72
CLIP3-205ENST00000592017 FAM106AQ4KMX7 169 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 ZNF114Q8NC26 417 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 SCARB1Q8WTV0 552 aa10.58□□□□□ -0.72
CLIP3-205ENST00000592017 IL22RA2Q969J5 263 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms