RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 PRRT1Q99946 306 aa20.65■□□□□ 0.9
SMAD4-213ENST00000591914 RTBDNQ9BSG5 229 aaPredicted RBP20.65■□□□□ 0.9
SMAD4-213ENST00000591914 ATG12O94817 140 aa20.64■□□□□ 0.89
SMAD4-213ENST00000591914 GPR183P32249 361 aa20.64■□□□□ 0.89
SMAD4-213ENST00000591914 HSPE1P61604 102 aaKnown RBP20.64■□□□□ 0.89
SMAD4-213ENST00000591914 IZUMO4Q1ZYL8 232 aa20.64■□□□□ 0.89
SMAD4-213ENST00000591914 FAM106AQ4KMX7 169 aa20.64■□□□□ 0.89
SMAD4-213ENST00000591914 OR1L6Q8NGR2 347 aa20.64■□□□□ 0.89
SMAD4-213ENST00000591914 THAP7Q9BT49 309 aaPredicted RBP20.64■□□□□ 0.89
SMAD4-213ENST00000591914 SLC2A8Q9NY64 477 aa20.64■□□□□ 0.89
SMAD4-213ENST00000591914 C14orf166Q9Y224 244 aaKnown RBP20.64■□□□□ 0.89
SMAD4-213ENST00000591914 IZUMO1RA6ND01 250 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 A8MWP6 167 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 FOLR2P14207 255 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 TRIM16LQ309B1 348 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 OR2C3Q8N628 320 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 OR51S1Q8NGJ8 323 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 OR1P1Q8NH06 330 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 C5orf66Q9H5L9 145 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 GPR132Q9UNW8 380 aa20.63■□□□□ 0.89
SMAD4-213ENST00000591914 A0A0B4J293 547 aa20.62■□□□□ 0.89
SMAD4-213ENST00000591914 ZNF701M0R085 212 aaPredicted RBP20.62■□□□□ 0.89
SMAD4-213ENST00000591914 EDN2P20800 178 aa20.62■□□□□ 0.89
SMAD4-213ENST00000591914 AKR1C2P52895 323 aa20.62■□□□□ 0.89
SMAD4-213ENST00000591914 ATP6V0BQ99437 205 aa20.62■□□□□ 0.89
SMAD4-213ENST00000591914 ASCL2Q99929 193 aa20.62■□□□□ 0.89
SMAD4-213ENST00000591914 TMEM222Q9H0R3 208 aa20.62■□□□□ 0.89
SMAD4-213ENST00000591914 ZC4H2Q9NQZ6 224 aa20.62■□□□□ 0.89
SMAD4-213ENST00000591914 K7EIM0 57 aa20.61■□□□□ 0.89
SMAD4-213ENST00000591914 FRMD6-AS1P0C7T7 363 aa20.61■□□□□ 0.89
SMAD4-213ENST00000591914 CD300EQ496F6 205 aaPredicted RBP20.61■□□□□ 0.89
SMAD4-213ENST00000591914 ZNF114Q8NC26 417 aa20.61■□□□□ 0.89
SMAD4-213ENST00000591914 ZNF320A2RRD8 509 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 TMEM213A2RRL7 107 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 OR5AC1P0C628 307 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 DEFB114Q30KQ6 69 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 PLET1Q6UQ28 207 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 DYNLRB2Q8TF09 96 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 SCARB1Q8WTV0 552 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 NAA60Q9H7X0 242 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 C21orf62Q9NYP8 219 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 V9GYH0 126 aa20.6■□□□□ 0.89
SMAD4-213ENST00000591914 TGOLN2O43493 480 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 CDS2O95674 445 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 IGHV4-30-4P0DP06 118 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 CBLN1P23435 193 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 UNQ9165/PRO28630Q6UXU0 137 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 SBSPONQ8IVN8 264 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 GLYATL2Q8WU03 294 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 BSCL2Q96G97 398 aaPredicted RBP20.59■□□□□ 0.89
SMAD4-213ENST00000591914 ZNF436Q9C0F3 470 aaPredicted RBP20.59■□□□□ 0.89
SMAD4-213ENST00000591914 PLEKHA3Q9HB20 300 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 TECRQ9NZ01 308 aaKnown RBP20.59■□□□□ 0.89
SMAD4-213ENST00000591914 SCP2D1Q9UJQ7 156 aa20.59■□□□□ 0.89
SMAD4-213ENST00000591914 IGHV3-21A0A0B4J1V1 117 aa20.58■□□□□ 0.89
SMAD4-213ENST00000591914 TEX13DA0A0J9YY54 714 aaPredicted RBP20.58■□□□□ 0.89
SMAD4-213ENST00000591914 OR2T8A6NH00 312 aa20.58■□□□□ 0.89
SMAD4-213ENST00000591914 CRYM-AS1A6NIL9 109 aa20.58■□□□□ 0.89
SMAD4-213ENST00000591914 A8MZ25 164 aa20.58■□□□□ 0.89
SMAD4-213ENST00000591914 F8W735 103 aaPredicted RBP20.58■□□□□ 0.89
SMAD4-213ENST00000591914 CACNG8Q8WXS5 425 aa20.58■□□□□ 0.89
SMAD4-213ENST00000591914 TRIM63Q969Q1 353 aa20.58■□□□□ 0.89
SMAD4-213ENST00000591914 RRNAD1Q96FB5 475 aaKnown RBP20.58■□□□□ 0.89
SMAD4-213ENST00000591914 A0A0G2JRQ6 117 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 INS-IGF2F8WCM5 200 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 ST8SIA3O43173 380 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 S100A5P33763 92 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 SPSB3Q6PJ21 355 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 GTSCR1Q86UQ5 136 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 SGPP2Q8IWX5 399 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 LHFPL5Q8TAF8 219 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 C19orf73Q9NVV2 129 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 MCUBQ9NWR8 336 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 U3KQK5 164 aa20.57■□□□□ 0.88
SMAD4-213ENST00000591914 IGHV3-35A0A0C4DH35 117 aa20.56■□□□□ 0.88
SMAD4-213ENST00000591914 ERHP84090 104 aaKnown RBP20.56■□□□□ 0.88
SMAD4-213ENST00000591914 DHODHQ02127 395 aa20.56■□□□□ 0.88
SMAD4-213ENST00000591914 ZNF79Q15937 498 aa20.56■□□□□ 0.88
SMAD4-213ENST00000591914 PYDC2Q56P42 97 aa20.56■□□□□ 0.88
SMAD4-213ENST00000591914 SPINK9Q5DT21 86 aa20.56■□□□□ 0.88
SMAD4-213ENST00000591914 CCDC190Q86UF4 302 aa20.56■□□□□ 0.88
SMAD4-213ENST00000591914 FAM219AQ8IW50 185 aa20.56■□□□□ 0.88
SMAD4-213ENST00000591914 PALMDQ9NP74 551 aa20.56■□□□□ 0.88
SMAD4-213ENST00000591914 ZNF785A8K8V0 405 aa20.55■□□□□ 0.88
SMAD4-213ENST00000591914 I3L2K1 104 aa20.55■□□□□ 0.88
SMAD4-213ENST00000591914 ELLP55199 621 aaPredicted RBP20.55■□□□□ 0.88
SMAD4-213ENST00000591914 KLF9Q13886 244 aaPredicted RBP20.55■□□□□ 0.88
SMAD4-213ENST00000591914 TM4SF20Q53R12 229 aa20.55■□□□□ 0.88
SMAD4-213ENST00000591914 RBPMSQ93062 196 aaKnown RBP20.55■□□□□ 0.88
SMAD4-213ENST00000591914 MISP3Q96FF7 219 aa20.55■□□□□ 0.88
SMAD4-213ENST00000591914 CHRDL1Q9BU40 450 aa20.55■□□□□ 0.88
SMAD4-213ENST00000591914 IFNA17P01571 189 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 AARDQ4LEZ3 155 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 Q6ZRM9 215 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 SELENOHQ8IZQ5 122 aaKnown RBP20.54■□□□□ 0.88
SMAD4-213ENST00000591914 SLC35G3Q8N808 338 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 UXS1Q8NBZ7 420 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 RNASE11Q8TAA1 199 aaKnown RBP20.54■□□□□ 0.88
SMAD4-213ENST00000591914 TMEM190Q8WZ59 177 aa20.54■□□□□ 0.88
SMAD4-213ENST00000591914 MARC2Q969Z3 335 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms