RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 HES4Q9HCC6 221 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 COL5A1P20908 1838 aaPredicted RBP10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 SPINK4O60575 86 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 PSG2P11465 335 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 PAX9P55771 341 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 RBM11P57052 281 aaKnown RBP10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 ID3Q02535 119 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 GAPTQ8N292 157 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 TMEM222Q9H0R3 208 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 EML6Q6ZMW3 1958 aa10.19□□□□□ -0.78
SMARCA4-217ENST00000591595 ZNF816-ZNF321PA0A0X1KG74 233 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 CTXND1A0A1B0GTU2 59 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 RPEL1Q2QD12 228 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 TRAT1Q6PIZ9 186 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 MMD2Q8IY49 270 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 OR2T6Q8NHC8 308 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 REG1BP48304 166 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 FOXE3Q13461 319 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 TMEM211Q6ICI0 200 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 TMEM136Q6ZRR5 245 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 TTC9CQ8N5M4 171 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 OR51H1Q8NH63 302 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 OR2D2Q9H210 308 aa10.18□□□□□ -0.78
SMARCA4-217ENST00000591595 TRBV20OR9-2A0A075B6H5 130 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 SCGB2A1O75556 95 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 MT-ATP8P03928 68 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 P04436 131 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 SCTP09683 121 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 WFDC2Q14508 124 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 LRRC75BQ2VPJ9 315 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 FOXL2NBQ6ZUU3 175 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 ZNF525Q8N782 197 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 FGFBP3Q8TAT2 258 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 AHCTF1Q8WYP5 2266 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 TRAV25A0A0B4J276 109 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 ETDBQ3ZM63 59 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 ZNF818PQ6ZRF7 136 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 MOB1BQ7L9L4 216 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 DDB2Q92466 427 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 OR2H1Q9GZK4 316 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 PPDPFQ9H3Y8 114 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 NGBQ9NPG2 151 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 CCL28Q9NRJ3 127 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 NPIPB5A8MRT5 1133 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 DKK1O94907 266 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 NTF4P34130 210 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 PI4KAP42356 2102 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 PCBD1P61457 104 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 SH2D6Q7Z4S9 175 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 TMEM191AQ9H0A3 160 aa10.17□□□□□ -0.78
SMARCA4-217ENST00000591595 ZNF407Q9C0G0 2248 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 A0A096LPE4 126 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 A0A1W2PPZ6 126 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 BCL3P20749 454 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 WIPI1Q5MNZ9 446 aaPredicted RBP10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 ACP7Q6ZNF0 438 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 IL1F10Q8WWZ1 152 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 GGTLC1Q9BX51 225 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 IGHV1-45A0A0A0MS14 117 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 GCSAMLQ5JQS6 135 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 VGLL1Q99990 258 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 MS4A6AQ9H2W1 248 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 EXPH5Q8NEV8 1989 aa10.16□□□□□ -0.78
SMARCA4-217ENST00000591595 CFIP05156 583 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 ATP5G3P48201 142 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 SRYQ05066 204 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 OR8B8Q15620 311 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 RNASEKQ6P5S7 137 aaKnown RBP10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 OCC1Q8TAD7 63 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 CRXO43186 299 aaPredicted RBP10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 CXCL12P48061 93 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 Q6ZPA2 131 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 PMCHL2Q9BQD1 86 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 IL36RNQ9UBH0 155 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 VPS13AQ96RL7 3174 aa10.15□□□□□ -0.78
SMARCA4-217ENST00000591595 IGKV1D-13A0A0B4J2D9 117 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 F8W1H4 67 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 H0Y980 276 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 HLA-DQA1P01909 254 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 IGKV1-13P0DP09 117 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 COX8AP10176 69 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 COX6A1P12074 109 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 CCL4P13236 92 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 INSL3P51460 131 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 CATR1Q13166 79 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 IZUMO4Q1ZYL8 232 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 Q6ZSR3 168 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 SPEM1Q8N4L4 309 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 RDH5Q92781 318 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 PROK2Q9HC23 129 aa10.15□□□□□ -0.79
SMARCA4-217ENST00000591595 SYS1-DBNDD2H3BUS1 97 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 SYNGR1O43759 233 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 VDAC2P45880 294 aaPredicted RBP10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 SLC35B1P78383 322 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 ARL16Q0P5N6 197 aa10.14□□□□□ -0.79
SMARCA4-217ENST00000591595 PSG7Q13046 419 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms