RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 Q6ZR03 302 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 STXBP6Q8NFX7 210 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 C10orf35Q96D05 121 aa12.57□□□□□ -0.4
CIRBP-228ENST00000590347 K7ESF4 209 aa12.56□□□□□ -0.4
CIRBP-228ENST00000590347 NDUFS8O00217 210 aa12.56□□□□□ -0.4
CIRBP-228ENST00000590347 MT-ND6P03923 174 aa12.56□□□□□ -0.4
CIRBP-228ENST00000590347 MOB3BQ86TA1 216 aa12.56□□□□□ -0.4
CIRBP-228ENST00000590347 WDR83OSQ9Y284 106 aa12.56□□□□□ -0.4
CIRBP-228ENST00000590347 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.56□□□□□ -0.4
CIRBP-228ENST00000590347 AGFG2O95081 481 aa12.56□□□□□ -0.4
CIRBP-228ENST00000590347 GGTLC1Q9BX51 225 aa12.56□□□□□ -0.4
CIRBP-228ENST00000590347 COMMD5Q9GZQ3 224 aa12.56□□□□□ -0.4
CIRBP-228ENST00000590347 SYS1-DBNDD2H3BUS1 97 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 SRSF7Q16629 238 aaKnown RBP eCLIP12.55□□□□□ -0.4
CIRBP-228ENST00000590347 FAM27BQ5VT28 67 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 SRXN1Q9BYN0 137 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 TSSC4Q9Y5U2 329 aaPredicted RBP12.55□□□□□ -0.4
CIRBP-228ENST00000590347 TRBV9A0A0B4J1U6 114 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 BRWD1-AS2P59051 145 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 EFNB3Q15768 340 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 CEACAM21Q3KPI0 293 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
CIRBP-228ENST00000590347 SLC25A40Q8TBP6 338 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 F11RQ9Y624 299 aaKnown RBP12.55□□□□□ -0.4
CIRBP-228ENST00000590347 PPIAL4EA0A075B759 164 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 LEPROTL1O95214 131 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 PPIAL4FP0DN26 164 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 CRYBA4P53673 196 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 FXYD7P58549 80 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 ARF6P62330 175 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 ZNF835Q9Y2P0 537 aa12.55□□□□□ -0.4
CIRBP-228ENST00000590347 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 OR10W1Q8NGF6 305 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 OR2K2Q8NGT1 345 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 DNAJC13O75165 2243 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 PLCE1Q9P212 2302 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.54□□□□□ -0.4
CIRBP-228ENST00000590347 OR9G9P0C7N8 305 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
CIRBP-228ENST00000590347 MYOD1P15172 320 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 C10orf128Q5T292 105 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 OR10AG1Q8NH19 301 aa12.54□□□□□ -0.4
CIRBP-228ENST00000590347 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 IGHV1-24A0A0C4DH33 117 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 A0A0J9YW62 118 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 A0A1W2PQM1 296 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 CCL7P80098 99 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 TMEM54Q969K7 222 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 OR2H1Q9GZK4 316 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 PRO3102Q9H379 93 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 ST20Q9HBF5 79 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 TMEM38BQ9NVV0 291 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 SPCS1Q9Y6A9 102 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 SCGB2A2Q13296 93 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 LYSMD4Q5XG99 296 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 GTF2H5Q6ZYL4 71 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 HSD17B10Q99714 261 aaKnown RBP12.53□□□□□ -0.4
CIRBP-228ENST00000590347 PLEKHA3Q9HB20 300 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 SCRT2Q9NQ03 307 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 TANC2Q9HCD6 1990 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 A0A1B0GX78 115 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 P04436 131 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 FOXG1P55316 489 aaPredicted RBP12.53□□□□□ -0.4
CIRBP-228ENST00000590347 TMEM97Q5BJF2 176 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 FAM120AOSQ5T036 256 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 UFSP1Q6NVU6 142 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 C2orf91Q6ZV80 131 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 MRPL21Q7Z2W9 205 aaKnown RBP12.53□□□□□ -0.4
CIRBP-228ENST00000590347 BPIFA4PQ86YQ2 179 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 DEFB123Q8N688 67 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 NUP35Q8NFH5 326 aa12.53□□□□□ -0.4
CIRBP-228ENST00000590347 EP300Q09472 2414 aaPredicted RBP12.52□□□□□ -0.4
CIRBP-228ENST00000590347 HCFC1P51610 2035 aa12.52□□□□□ -0.4
CIRBP-228ENST00000590347 LINC00473A8K010 186 aa12.52□□□□□ -0.4
CIRBP-228ENST00000590347 VWC2LB2RUY7 222 aa12.52□□□□□ -0.4
CIRBP-228ENST00000590347 KIR3DS1Q14943 382 aa12.52□□□□□ -0.4
CIRBP-228ENST00000590347 SPSB4Q96A44 273 aa12.52□□□□□ -0.4
CIRBP-228ENST00000590347 A0A1W2PRE2 83 aa12.52□□□□□ -0.41
CIRBP-228ENST00000590347 GGTLC3B5MD39 225 aa12.52□□□□□ -0.41
CIRBP-228ENST00000590347 ISLRO14498 428 aa12.52□□□□□ -0.41
CIRBP-228ENST00000590347 RPS20P60866 119 aaKnown RBP12.52□□□□□ -0.41
CIRBP-228ENST00000590347 WDR82Q6UXN9 313 aa12.52□□□□□ -0.41
CIRBP-228ENST00000590347 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.41
CIRBP-228ENST00000590347 NEU4Q8WWR8 484 aaPredicted RBP12.52□□□□□ -0.41
CIRBP-228ENST00000590347 TRGV10A0A0A0MS01 117 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 NCR2O95944 276 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 IGFBP2P18065 325 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 CKS1BP61024 79 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 FOXB1Q99853 325 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 C19orf24Q9BVV8 132 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 SAP30LQ9HAJ7 183 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 EXPH5Q8NEV8 1989 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 TRAV9-1A0A075B6T8 112 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 HIGD1CA8MV81 97 aa12.51□□□□□ -0.41
CIRBP-228ENST00000590347 CXorf67Q86X51 503 aaPredicted RBP12.51□□□□□ -0.41
CIRBP-228ENST00000590347 GUCD1Q96NT3 240 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms