RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 IGHV4-30-4P0DP06 118 aa13.65□□□□□ -0.22
CIRBP-227ENST00000590188 TNFSF8P32971 234 aa13.65□□□□□ -0.22
CIRBP-227ENST00000590188 SSBP1Q04837 148 aaKnown RBP13.65□□□□□ -0.22
CIRBP-227ENST00000590188 FAM106AQ4KMX7 169 aa13.65□□□□□ -0.22
CIRBP-227ENST00000590188 PLET1Q6UQ28 207 aa13.65□□□□□ -0.22
CIRBP-227ENST00000590188 GPHB5Q86YW7 130 aa13.65□□□□□ -0.22
CIRBP-227ENST00000590188 SGPP2Q8IWX5 399 aa13.65□□□□□ -0.22
CIRBP-227ENST00000590188 CADM3Q8N126 398 aa13.65□□□□□ -0.22
CIRBP-227ENST00000590188 UBAC2Q8NBM4 344 aa13.65□□□□□ -0.22
CIRBP-227ENST00000590188 FABP12A6NFH5 140 aa13.64□□□□□ -0.23
CIRBP-227ENST00000590188 UNQ9165/PRO28630Q6UXU0 137 aa13.64□□□□□ -0.23
CIRBP-227ENST00000590188 MISP3Q96FF7 219 aa13.64□□□□□ -0.23
CIRBP-227ENST00000590188 C14orf166Q9Y224 244 aaKnown RBP13.64□□□□□ -0.23
CIRBP-227ENST00000590188 COL7A1Q02388 2944 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 LGALS9O00182 355 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 TGOLN2O43493 480 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 GUCA2BQ16661 112 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 DEFB114Q30KQ6 69 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 TM4SF20Q53R12 229 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 GTSCR1Q86UQ5 136 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 OR51S1Q8NGJ8 323 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 RNASE11Q8TAA1 199 aaKnown RBP13.63□□□□□ -0.23
CIRBP-227ENST00000590188 VN1R17PQ8TDU5 208 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 SCARB1Q8WTV0 552 aa13.63□□□□□ -0.23
CIRBP-227ENST00000590188 RTBDNQ9BSG5 229 aaPredicted RBP13.63□□□□□ -0.23
CIRBP-227ENST00000590188 NXF2Q9GZY0 626 aaKnown RBP13.63□□□□□ -0.23
CIRBP-227ENST00000590188 RSL24D1Q9UHA3 163 aaKnown RBP13.63□□□□□ -0.23
CIRBP-227ENST00000590188 A0A0G2JRQ6 117 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 TEX13DA0A0J9YY54 714 aaPredicted RBP13.62□□□□□ -0.23
CIRBP-227ENST00000590188 ANKRD20A5PA0PJZ0 165 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 TMEM213A2RRL7 107 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 K7EIM0 57 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 GSTZ1O43708 216 aaPredicted RBP13.62□□□□□ -0.23
CIRBP-227ENST00000590188 OR5AC1P0C628 307 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 CBLN1P23435 193 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 HSPE1P61604 102 aaKnown RBP13.62□□□□□ -0.23
CIRBP-227ENST00000590188 PRCDQ00LT1 54 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 Q56UQ5 140 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 OR2C3Q8N628 320 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 UXS1Q8NBZ7 420 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 OR2K2Q8NGT1 345 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 WDR89Q96FK6 387 aaPredicted RBP13.62□□□□□ -0.23
CIRBP-227ENST00000590188 WWC2-AS2Q96NR7 200 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 THAP7Q9BT49 309 aaPredicted RBP13.62□□□□□ -0.23
CIRBP-227ENST00000590188 C5orf66Q9H5L9 145 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 PLEKHA3Q9HB20 300 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 MCUBQ9NWR8 336 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 C21orf62Q9NYP8 219 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 RABL2AQ9UBK7 228 aaPredicted RBP13.62□□□□□ -0.23
CIRBP-227ENST00000590188 RABL2BQ9UNT1 228 aa13.62□□□□□ -0.23
CIRBP-227ENST00000590188 IGHV3OR16-8A0A075B7F1 116 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 A0A0B4J293 547 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 IGHV3-48P01763 117 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 UCP1P25874 307 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 CD81P60033 236 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 PINX1Q96BK5 328 aaKnown RBP13.61□□□□□ -0.23
CIRBP-227ENST00000590188 SOSTQ9BQB4 213 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 CHRDL1Q9BU40 450 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 NAA60Q9H7X0 242 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 MLXQ9UH92 298 aa13.61□□□□□ -0.23
CIRBP-227ENST00000590188 ZNF785A8K8V0 405 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 ST8SIA3O43173 380 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 ATG12O94817 140 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 IFNA17P01571 189 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 CD7P09564 240 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 P0C879 139 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 PYDC2Q56P42 97 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 BTNL8Q6UX41 500 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 SLC35G3Q8N808 338 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 OR1L6Q8NGR2 347 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 OR1P1Q8NH06 330 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 LHFPL5Q8TAF8 219 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 RRNAD1Q96FB5 475 aaKnown RBP13.6□□□□□ -0.23
CIRBP-227ENST00000590188 PRRT1Q99946 306 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 WFDC10AQ9H1F0 79 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 TUBA4BQ9H853 241 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 PRR13Q9NZ81 148 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 GPR132Q9UNW8 380 aa13.6□□□□□ -0.23
CIRBP-227ENST00000590188 A8MWP6 167 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 F8W735 103 aaPredicted RBP13.59□□□□□ -0.23
CIRBP-227ENST00000590188 ZNF207O43670 478 aaKnown RBP13.59□□□□□ -0.23
CIRBP-227ENST00000590188 ETV6P41212 452 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 HOXA1P49639 335 aaPredicted RBP13.59□□□□□ -0.23
CIRBP-227ENST00000590188 ERHP84090 104 aaKnown RBP13.59□□□□□ -0.23
CIRBP-227ENST00000590188 ZNF57Q68EA5 555 aaPredicted RBP13.59□□□□□ -0.23
CIRBP-227ENST00000590188 BSCL2Q96G97 398 aaPredicted RBP13.59□□□□□ -0.23
CIRBP-227ENST00000590188 RCHY1Q96PM5 261 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 NEURL2Q9BR09 285 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 PDCD10Q9BUL8 212 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 C20orf24Q9BUV8 137 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 TMEM222Q9H0R3 208 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 RBM38Q9H0Z9 239 aaKnown RBP13.59□□□□□ -0.23
CIRBP-227ENST00000590188 PALMDQ9NP74 551 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 C19orf73Q9NVV2 129 aa13.59□□□□□ -0.23
CIRBP-227ENST00000590188 TECRQ9NZ01 308 aaKnown RBP13.59□□□□□ -0.23
CIRBP-227ENST00000590188 SCAF4O95104 1147 aaKnown RBP13.58□□□□□ -0.24
CIRBP-227ENST00000590188 MT-CO2P00403 227 aa13.58□□□□□ -0.24
CIRBP-227ENST00000590188 SURF2Q15527 256 aaPredicted RBP13.58□□□□□ -0.24
CIRBP-227ENST00000590188 TMEM61Q8N0U2 210 aa13.58□□□□□ -0.24
CIRBP-227ENST00000590188 GLYATL2Q8WU03 294 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms