RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 C20orf24Q9BUV8 137 aa9.44□□□□□ -0.9
RFX1-207ENST00000589937 C21orf62Q9NYP8 219 aa9.44□□□□□ -0.9
RFX1-207ENST00000589937 PLECQ15149 4684 aaKnown RBP9.43□□□□□ -0.9
RFX1-207ENST00000589937 FAM25AB3EWG3 89 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 FAM25CB3EWG5 89 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 FAM25GB3EWG6 89 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 SNAPC5O75971 98 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 PPP5CP53041 499 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 EWSR1Q01844 656 aaKnown RBP eCLIP9.43□□□□□ -0.9
RFX1-207ENST00000589937 CTF1Q16619 201 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 Q56UQ5 140 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 THOC7Q6I9Y2 204 aaKnown RBP9.43□□□□□ -0.9
RFX1-207ENST00000589937 OR4D10Q8NGI6 311 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 OR1L6Q8NGR2 347 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 OR52I2Q8NH67 350 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 MISP3Q96FF7 219 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 BSCL2Q96G97 398 aaPredicted RBP9.43□□□□□ -0.9
RFX1-207ENST00000589937 GGTLC1Q9BX51 225 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 SCPEP1Q9HB40 452 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 THYN1Q9P016 225 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 KLK11Q9UBX7 282 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 PRNDQ9UKY0 176 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 UFC1Q9Y3C8 167 aa9.43□□□□□ -0.9
RFX1-207ENST00000589937 GABARAPO95166 117 aa9.42□□□□□ -0.9
RFX1-207ENST00000589937 IGKV1-5P01602 117 aa9.42□□□□□ -0.9
RFX1-207ENST00000589937 CD3DP04234 171 aa9.42□□□□□ -0.9
RFX1-207ENST00000589937 ZNF124Q15973 351 aa9.42□□□□□ -0.9
RFX1-207ENST00000589937 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
RFX1-207ENST00000589937 TP53RKQ96S44 253 aa9.42□□□□□ -0.9
RFX1-207ENST00000589937 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
RFX1-207ENST00000589937 DAZ1Q9NQZ3 744 aaKnown RBP9.42□□□□□ -0.9
RFX1-207ENST00000589937 MRPL27Q9P0M9 148 aaKnown RBP9.42□□□□□ -0.9
RFX1-207ENST00000589937 IGHV3OR16-13A0A075B7E8 117 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 IGHV3-74A0A0B4J1X5 117 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 SMIM31A0A1B0GVY4 71 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 I3L2K1 104 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 NDUFA4O00483 81 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 CTSGP08311 255 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 PGAM2P15259 253 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 ELLP55199 621 aaPredicted RBP9.41□□□□□ -0.9
RFX1-207ENST00000589937 GPR107Q5VW38 600 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 FAAP20Q6NZ36 180 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 H2BFWTQ7Z2G1 175 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 HSD17B13Q7Z5P4 300 aaPredicted RBP9.41□□□□□ -0.9
RFX1-207ENST00000589937 SLC38A6Q8IZM9 456 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 OR2C3Q8N628 320 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 OR5B3Q8NH48 314 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 MARC2Q969Z3 335 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 ABHD1Q96SE0 405 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 MIXL1Q9H2W2 232 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 C5orf66Q9H5L9 145 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 EXTL2Q9UBQ6 330 aa9.41□□□□□ -0.9
RFX1-207ENST00000589937 LOC102724200A0A096LPH7 203 aaPredicted RBP9.4□□□□□ -0.9
RFX1-207ENST00000589937 A0A0G2JRQ6 117 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 MT-CO2P00403 227 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 CTSDP07339 412 aaPredicted RBP9.4□□□□□ -0.9
RFX1-207ENST00000589937 RPL35AP18077 110 aaKnown RBP9.4□□□□□ -0.9
RFX1-207ENST00000589937 RORCP51449 518 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 UCP3P55916 312 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 PRCDQ00LT1 54 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 DEFB135Q30KP9 77 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 SPSB3Q6PJ21 355 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 LHFPL1Q86WI0 220 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 OR1P1Q8NH06 330 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 OR4A16Q8NH70 328 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 PINX1Q96BK5 328 aaKnown RBP9.4□□□□□ -0.9
RFX1-207ENST00000589937 TMEM56Q96MV1 263 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 RNF2Q99496 336 aa9.4□□□□□ -0.9
RFX1-207ENST00000589937 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.9
RFX1-207ENST00000589937 AGRNO00468 2067 aa9.4□□□□□ -0.91
RFX1-207ENST00000589937 IGKV3-7A0A075B6H7 116 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 TRAV25A0A0B4J276 109 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 TSPAN4O14817 238 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 CYB5BO43169 146 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 P0C879 139 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 TFPI2P48307 235 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 PIGPP57054 158 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 SPCS2Q15005 226 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 SP6Q3SY56 376 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 RNASE10Q5GAN6 216 aaKnown RBP9.39□□□□□ -0.91
RFX1-207ENST00000589937 CADM3Q8N126 398 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 CMTM3Q96MX0 182 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 TSC22D3Q99576 134 aa9.39□□□□□ -0.91
RFX1-207ENST00000589937 A0A0B4J293 547 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 A0A0J9YWU9 116 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 ST8SIA3O43173 380 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 YIF1AO95070 293 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 RND3P61587 244 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 PMS2P11Q13670 270 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 ANKRD55Q3KP44 614 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 LPCAT3Q6P1A2 487 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 ZNF114Q8NC26 417 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 OR13C8Q8NGS7 320 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 FAM212BQ9NTI7 297 aaPredicted RBP9.38□□□□□ -0.91
RFX1-207ENST00000589937 FKBP11Q9NYL4 201 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 MRPL36Q9P0J6 103 aaKnown RBP9.38□□□□□ -0.91
RFX1-207ENST00000589937 MTFP1Q9UDX5 166 aa9.38□□□□□ -0.91
RFX1-207ENST00000589937 IGHV3-66A0A0C4DH42 116 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms