RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 COMMD5Q9GZQ3 224 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 NF1P21359 2839 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 ELOA3CA0A087WX78 387 aaPredicted RBP8.67□□□□□ -1.02
ZNF540-208ENST00000589857 IGHV1-69-2A0A0G2JMI3 117 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 ZNF98A6NK75 572 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 H7BYZ3 331 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 RRHO14718 337 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 CA2P00918 260 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 IL6RP08887 468 aaPredicted RBP8.67□□□□□ -1.02
ZNF540-208ENST00000589857 STAG3L2P0CL84 134 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 STAG3L3P0CL85 134 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 CT45A6P0DMU7 189 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 CT45A5P0DMU8 189 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 CT45A7P0DMV0 189 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 IGFBP2P18065 325 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 GPX4P36969 197 aaPredicted RBP8.67□□□□□ -1.02
ZNF540-208ENST00000589857 SRP14P37108 136 aaKnown RBP8.67□□□□□ -1.02
ZNF540-208ENST00000589857 MEOX2P50222 304 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 TAS2R45P59539 299 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 B2MP61769 119 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 SNRPEP62304 92 aaKnown RBP8.67□□□□□ -1.02
ZNF540-208ENST00000589857 VMA21Q3ZAQ7 101 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 PNKDQ8N490 385 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 OR4C13Q8NGP0 309 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 OR9G1Q8NH87 305 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 CACNG8Q8WXS5 425 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 H1FXQ92522 213 aaKnown RBP8.67□□□□□ -1.02
ZNF540-208ENST00000589857 CCL17Q92583 94 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 FLYWCH2Q96CP2 140 aaKnown RBP8.67□□□□□ -1.02
ZNF540-208ENST00000589857 HARBI1Q96MB7 349 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 PARLQ9H300 379 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 TMEM167BQ9NRX6 74 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 DOK5Q9P104 306 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 SLC45A2Q9UMX9 530 aa8.67□□□□□ -1.02
ZNF540-208ENST00000589857 LSM4Q9Y4Z0 139 aaKnown RBP8.67□□□□□ -1.02
ZNF540-208ENST00000589857 A0A087X0M5 115 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 A0A1B0GX30 115 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 A0A1W2PPE3 182 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 FAM90A27PA6NNH2 459 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 SHISA9B4DS77 424 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 PAGE4O60829 102 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 RBP4P02753 201 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 LGALS7P47929 136 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 ZNF137PP52743 207 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 LINC00205P59089 165 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 TMEM144Q7Z5S9 345 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 VKORC1L1Q8N0U8 176 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 ABHD12Q8N2K0 398 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 OR5AN1Q8NGI8 311 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 Q8WTZ3 238 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 NEUROG1Q92886 237 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 LEAP2Q969E1 77 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 RPUSD4Q96CM3 377 aaKnown RBP8.66□□□□□ -1.02
ZNF540-208ENST00000589857 WFIKKN1Q96NZ8 548 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 C12orf57Q99622 126 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 MGST2Q99735 147 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 HINT2Q9BX68 163 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 TMPRSS5Q9H3S3 457 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 WASHC3Q9Y3C0 194 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 AMMECR1Q9Y4X0 333 aaPredicted RBP8.66□□□□□ -1.02
ZNF540-208ENST00000589857 TACC2O95359 2948 aa8.66□□□□□ -1.02
ZNF540-208ENST00000589857 AKAP9Q99996 3911 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 H0YJW9 148 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 TNFRSF13BO14836 293 aaPredicted RBP8.65□□□□□ -1.02
ZNF540-208ENST00000589857 IGHV3-7P01780 117 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 IGHV2-5P01817 119 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 PRRX1P54821 245 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 RPL8P62917 257 aaKnown RBP8.65□□□□□ -1.02
ZNF540-208ENST00000589857 RPL19P84098 196 aaKnown RBP8.65□□□□□ -1.02
ZNF540-208ENST00000589857 FABP9Q0Z7S8 132 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 CDSNQ15517 529 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 TMEM155Q4W5P6 130 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 CST9LP1Q5W188 147 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 TMEM200BQ69YZ2 307 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 DUX4L9Q6RFH8 374 aaPredicted RBP8.65□□□□□ -1.02
ZNF540-208ENST00000589857 C22orf34Q6ZV56 151 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 STPG3Q8N7X2 389 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 TMEM167AQ8TBQ9 72 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
ZNF540-208ENST00000589857 IMMP2LQ96T52 175 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 MRPL32Q9BYC8 188 aaKnown RBP8.65□□□□□ -1.02
ZNF540-208ENST00000589857 MRPL20Q9BYC9 149 aaKnown RBP8.65□□□□□ -1.02
ZNF540-208ENST00000589857 LY96Q9Y6Y9 160 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 NAV3Q8IVL0 2385 aa8.65□□□□□ -1.02
ZNF540-208ENST00000589857 TEX50A0A1B0GTY4 177 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 E7EQL1 145 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 DVL1O14640 695 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 YIF1AO95070 293 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 SAA1P0DJI8 122 aaPredicted RBP8.64□□□□□ -1.03
ZNF540-208ENST00000589857 AREGP15514 252 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 S100A2P29034 98 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 PPOXP50336 477 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 RPS16P62249 146 aaKnown RBP8.64□□□□□ -1.03
ZNF540-208ENST00000589857 RPL23P62829 140 aaKnown RBP8.64□□□□□ -1.03
ZNF540-208ENST00000589857 LCN2P80188 198 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 HLA-DRB5Q30154 266 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 MIC13Q5XKP0 118 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 ETFRF1Q6IPR1 90 aa8.64□□□□□ -1.03
ZNF540-208ENST00000589857 PQLC2Q6ZP29 291 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms