RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 WIPF2Q8TF74 440 aaPredicted RBP11.88□□□□□ -0.51
ATG4D-211ENST00000589753 WDR89Q96FK6 387 aaPredicted RBP11.88□□□□□ -0.51
ATG4D-211ENST00000589753 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
ATG4D-211ENST00000589753 ZNF436Q9C0F3 470 aaPredicted RBP11.88□□□□□ -0.51
ATG4D-211ENST00000589753 ZNF355PQ9NSJ1 428 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 ZFP57Q9NU63 452 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 LSM5Q9Y4Y9 91 aaKnown RBP11.88□□□□□ -0.51
ATG4D-211ENST00000589753 H3BUA1 57 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 K7EPK0 472 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 LY86O95711 162 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 C11orf87Q6NUJ2 197 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 C19orf35Q6ZS72 473 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 ZNF114Q8NC26 417 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 OR4X2Q8NGF9 303 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 ASB13Q8WXK3 278 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 P2RX4Q99571 388 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 RCL1Q9Y2P8 373 aaKnown RBP11.87□□□□□ -0.51
ATG4D-211ENST00000589753 F11RQ9Y624 299 aaKnown RBP11.87□□□□□ -0.51
ATG4D-211ENST00000589753 JMJD1CQ15652 2540 aa11.87□□□□□ -0.51
ATG4D-211ENST00000589753 A0A1B0GVG6 124 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 CYB5BO43169 146 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 BRI3O95415 125 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 PRH1P02810 166 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 ELANEP08246 267 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 GIPP09681 153 aaPredicted RBP11.86□□□□□ -0.51
ATG4D-211ENST00000589753 PF4V1P10720 104 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 PSMB8P28062 276 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 HTR2BP41595 481 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 SUB1P53999 127 aaKnown RBP eCLIP11.86□□□□□ -0.51
ATG4D-211ENST00000589753 FOXE3Q13461 319 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 LRRC37A5PQ49AS3 106 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 TMEM65Q6PI78 240 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 SLC24A4Q8NFF2 622 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 RAB40CQ96S21 281 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 SLA2Q9H6Q3 261 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 U3KQ87 197 aa11.86□□□□□ -0.51
ATG4D-211ENST00000589753 L7N2F9 121 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 IFNA10P01566 189 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 RNASE2P10153 161 aaKnown RBP11.85□□□□□ -0.51
ATG4D-211ENST00000589753 HIST1H1BP16401 226 aaKnown RBP11.85□□□□□ -0.51
ATG4D-211ENST00000589753 PVALBP20472 110 aaPredicted RBP11.85□□□□□ -0.51
ATG4D-211ENST00000589753 VAMP2P63027 116 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 RPP30P78346 268 aaKnown RBP11.85□□□□□ -0.51
ATG4D-211ENST00000589753 BSXQ3C1V8 233 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 SLC25A24Q6NUK1 477 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 CHAC2Q8WUX2 184 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 WFDC12Q8WWY7 111 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 SMIM8Q96KF7 97 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 PSENENQ9NZ42 101 aa11.85□□□□□ -0.51
ATG4D-211ENST00000589753 SETD2Q9BYW2 2564 aaPredicted RBP11.85□□□□□ -0.51
ATG4D-211ENST00000589753 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 TRBV9A0A0B4J1U6 114 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 DEDDO75618 318 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 TRGV3P03979 118 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 RLN2P04090 185 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 PET100P0DJ07 73 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 NPY1RP25929 384 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 RAB9AP51151 201 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 MFAP2P55001 183 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 PAX9P55771 341 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 TPPP2P59282 170 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 TAS2R30P59541 319 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 RAP2BP61225 183 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 CD83Q01151 205 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 KLK9Q2XQG4 91 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 C2orf83Q53S99 150 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 LCNL1Q6ZST4 164 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 NOXA1Q86UR1 476 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 RNF152Q8N8N0 203 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 FANCD2OSQ96PS1 177 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 KLK15Q9H2R5 256 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 KLK9Q9UKQ9 250 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 DMRT1Q9Y5R6 373 aa11.84□□□□□ -0.51
ATG4D-211ENST00000589753 H3BP45 60 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 OR2J3O76001 311 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 MPC2O95563 127 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 TMEM50AO95807 157 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 RPLP1P05386 114 aaKnown RBP11.83□□□□□ -0.52
ATG4D-211ENST00000589753 CD28P10747 220 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 BCAP31P51572 246 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 ATP5IP56385 69 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-211ENST00000589753 RPL23AP62750 156 aaKnown RBP11.83□□□□□ -0.52
ATG4D-211ENST00000589753 RHOGP84095 191 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 TCTEX1D4Q5JR98 221 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 SPANXN5Q5MJ07 72 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 C11orf1Q9H5F2 150 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 THYN1Q9P016 225 aa11.83□□□□□ -0.52
ATG4D-211ENST00000589753 STRAPQ9Y3F4 350 aaKnown RBP11.83□□□□□ -0.52
ATG4D-211ENST00000589753 FAM223BA6NKX1 122 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 H0YIZ8 118 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 CORTO00230 105 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 TSC22D2O75157 780 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 KRTAP10-3P60369 221 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 RAB11AP62491 216 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 PVRIGQ6DKI7 326 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms